RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CBX4O00257 560 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 EEF2KO00418 725 aaKnown RBP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ACOT8O14734 319 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 GRID2O43424 1007 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 MFSD11O43934 449 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 KLHL18O94889 574 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 CRTAMO95727 393 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 F9P00740 461 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ASLP04424 464 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 TFAP2AP05549 437 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 FAM58BPP0C7Q3 252 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 SMIM18P0DKX4 95 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 PTPN3P26045 913 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ITPKBP27987 946 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 PSMB4P28070 264 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 CD6P30203 668 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ADRA1BP35368 520 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 DPP6P42658 865 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 SULT1E1P49888 294 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ATP4BP51164 291 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 TPMTP51580 245 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 TUBA4AP68366 448 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 TXNL4AP83876 142 aaKnown RBP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 CYP4F3Q08477 520 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 NSUN2Q08J23 767 aaKnown RBP eCLIP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 CDH17Q12864 832 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 DLG1Q12959 904 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ART3Q13508 389 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 APOFQ13790 326 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 PRPSAP1Q14558 356 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 MAPRE1Q15691 268 aaKnown RBP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 GEN1Q17RS7 908 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 HLA-BQ31612 363 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ARL13BQ3SXY8 428 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 SLC9B1Q4ZJI4 515 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 EMC4Q5J8M3 183 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 SYCP2LQ5T4T6 812 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ACBD5Q5T8D3 534 aaPredicted RBP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 FNDC7Q5VTL7 733 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 LPCAT4Q643R3 524 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 GRAMD4Q6IC98 578 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 NAPEPLDQ6IQ20 393 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 KLC3Q6P597 504 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 PCSK4Q6UW60 755 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 KIAA1324Q6UXG2 1013 aaKnown RBP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 KIAA0408Q6ZU52 694 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 RFX8Q6ZV50 586 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 BEND5Q7L4P6 421 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 PID1Q7Z2X4 250 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 GALNT7Q86SF2 657 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 SCD5Q86SK9 330 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 KCNMB4Q86W47 210 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ZC3HC1Q86WB0 502 aaKnown RBP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 SNX32Q86XE0 403 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 CACUL1Q86Y37 369 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 EGFL6Q8IUX8 553 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 LRRC49Q8IUZ0 686 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 CHPFQ8IZ52 775 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 DSELQ8IZU8 1212 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 Q8N1Y9 231 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 SCML4Q8N228 414 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 SLC25A41Q8N5S1 370 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 CCDC185Q8N715 623 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 PACRGLQ8N7B6 248 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ZNF781Q8N8C0 355 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 TMEM145Q8NBT3 493 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 CEP70Q8NHQ1 597 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 HM13Q8TCT9 377 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 SORCS1Q8WY21 1168 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 OVCA2Q8WZ82 227 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ZNF669Q96BR6 464 aaPredicted RBP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 HDAC11Q96DB2 347 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ASB9Q96DX5 294 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 CCDC140Q96MF4 163 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 PLEKHG4BQ96PX9 1271 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 OR14A2Q96R54 314 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 CDRT15Q96T59 188 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 LGMNQ99538 433 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 KCNJ15Q99712 375 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 DDX50Q9BQ39 737 aaKnown RBP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 TRMOQ9BU70 441 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 EFHD1Q9BUP0 239 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 OSBPL11Q9BXB4 747 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 BBS2Q9BXC9 721 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 DUSP16Q9BY84 665 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 RBM38Q9H0Z9 239 aaKnown RBP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 GAREM1Q9H706 876 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 WDR41Q9HAD4 459 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ZBTB26Q9HCK0 441 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 CSNK1G1Q9HCP0 422 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ITM2CQ9NQX7 267 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 TUBA8Q9NY65 449 aaPredicted RBP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ACTR10Q9NZ32 417 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 KIAA1522Q9P206 1035 aaPredicted RBP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 THAP10Q9P2Z0 257 aaPredicted RBP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 ASH2LQ9UBL3 628 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 EIF2B4Q9UI10 523 aaKnown RBP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 PTBP2Q9UKA9 531 aaKnown RBP4.8□□□□□ -1.64
CKS1B-201ENST00000308987 VANGL2Q9ULK5 521 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 CDYLQ9Y232 598 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms