RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 HSPE1-MOB4S4R3N1 261 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 SERTM1A2A2V5 107 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 TBL1XO60907 577 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 CLPXO76031 633 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 TRIM16O95361 564 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 ITGAMP11215 1152 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 BCKDHAP12694 445 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 COL9A1P20849 921 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 MZF1P28698 734 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-201ENST00000277198 SPAM1P38567 509 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 NSG1P42857 185 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 MAGEA2P43356 314 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 GZMMP51124 257 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 RPS14P62263 151 aaKnown RBP12.56□□□□□ -0.4
C9orf3-201ENST00000277198 BCL2L1Q07817 233 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 KCNAB2Q13303 367 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 HTR4Q13639 388 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 NKG7Q16617 165 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 CDKN3Q16667 212 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 PHKG1Q16816 387 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 IER5LQ5T953 404 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 ZNF691Q5VV52 312 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 LRRC70Q7Z2Q7 622 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 PGBD3Q8N328 593 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 FAM86B1Q8N7N1 296 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 SETD9Q8NE22 299 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 GIPC3Q8TF64 312 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 PYURFQ96I23 114 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 CCDC138Q96M89 665 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 ZSWIM3Q96MP5 696 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 KXD1Q9BQD3 176 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 CPPED1Q9BRF8 314 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-201ENST00000277198 BOCQ9BWV1 1114 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 NAA50Q9GZZ1 169 aaKnown RBP12.56□□□□□ -0.4
C9orf3-201ENST00000277198 LHPPQ9H008 270 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 RNF38Q9H0F5 515 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 SLC32A1Q9H598 525 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 IKZF5Q9H5V7 419 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 CRLS1Q9UJA2 301 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 ERVW-1Q9UQF0 538 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 FCF1Q9Y324 198 aaKnown RBP12.56□□□□□ -0.4
C9orf3-201ENST00000277198 SNX5Q9Y5X3 404 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 COL4A3Q01955 1670 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 C1orf232A0A0U1RR37 186 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 GPR39O43194 453 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 B4GAT1O43505 415 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 MRPS14O60783 128 aaKnown RBP12.56□□□□□ -0.4
C9orf3-201ENST00000277198 POU2F2P09086 479 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 ALPIP09923 528 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 ZNF182P17025 639 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-201ENST00000277198 CTPS1P17812 591 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 BMXP51813 675 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 PLA2G16P53816 162 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 CXCR4P61073 352 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 HMGCS1Q01581 520 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 ZNF33BQ06732 778 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 ABRQ12979 859 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 BNIP3Q12983 259 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 PTPRRQ15256 657 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 SHQ1Q6PI26 577 aaKnown RBP12.56□□□□□ -0.4
C9orf3-201ENST00000277198 TMC8Q8IU68 726 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 NXPE1Q8N323 547 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 ARL10Q8N8L6 244 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 TANKQ92844 425 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 MUL1Q969V5 352 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 FAM120BQ96EK7 910 aaKnown RBP12.56□□□□□ -0.4
C9orf3-201ENST00000277198 GABARAPL1Q9H0R8 117 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 TRIT1Q9H3H1 467 aaKnown RBP12.56□□□□□ -0.4
C9orf3-201ENST00000277198 RAD21L1Q9H4I0 556 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 SMURF2Q9HAU4 748 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 PARVBQ9HBI1 364 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 SNX6Q9UNH7 406 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 SAMD4AQ9UPU9 718 aaKnown RBP12.56□□□□□ -0.4
C9orf3-201ENST00000277198 PCDHB14Q9Y5E9 798 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 MAGED1Q9Y5V3 778 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-201ENST00000277198 PRSS21Q9Y6M0 314 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 CROCCQ5TZA2 2017 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 MUC6Q6W4X9 2439 aa12.56□□□□□ -0.4
C9orf3-201ENST00000277198 PRR33A8MZF0 331 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 ANHXE9PGG2 379 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 FFAR3O14843 346 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 GPR42O15529 346 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 UGT2B11O75310 529 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 E2F6O75461 281 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 CCNDBP1O95273 360 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 HNRNPCP07910 306 aaKnown RBP eCLIP12.55□□□□□ -0.4
C9orf3-201ENST00000277198 HOXB9P17482 250 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-201ENST00000277198 PTPN2P17706 415 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 S100A3P33764 101 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 GDF5P43026 501 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 HNMTP50135 292 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 GSTM4Q03013 218 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 CD47Q08722 323 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 SIGLEC14Q08ET2 396 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 CDH18Q13634 790 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 BOP1Q14137 746 aaKnown RBP12.55□□□□□ -0.4
C9orf3-201ENST00000277198 TAF12Q16514 161 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 DPY19L1Q2PZI1 675 aa12.55□□□□□ -0.4
C9orf3-201ENST00000277198 ATXN7L2Q5T6C5 722 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-201ENST00000277198 DUS1LQ6P1R4 473 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms