RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ATG14Q6ZNE5 492 aa15.24■□□□□ 0.03
CCDC90B-201ENST00000260054 USP53Q70EK8 1073 aa15.24■□□□□ 0.03
CCDC90B-201ENST00000260054 TRIM73Q86UV7 250 aa15.24■□□□□ 0.03
CCDC90B-201ENST00000260054 OR2L3Q8NG85 312 aa15.24■□□□□ 0.03
CCDC90B-201ENST00000260054 PPP1R14CQ8TAE6 165 aa15.24■□□□□ 0.03
CCDC90B-201ENST00000260054 TRPC4APQ8TEL6 797 aa15.24■□□□□ 0.03
CCDC90B-201ENST00000260054 SREK1Q8WXA9 508 aaKnown RBP15.24■□□□□ 0.03
CCDC90B-201ENST00000260054 NEIL2Q969S2 332 aa15.24■□□□□ 0.03
CCDC90B-201ENST00000260054 CDC6Q99741 560 aa15.24■□□□□ 0.03
CCDC90B-201ENST00000260054 HAUS8Q9BT25 410 aa15.24■□□□□ 0.03
CCDC90B-201ENST00000260054 PCBD2Q9H0N5 130 aa15.24■□□□□ 0.03
CCDC90B-201ENST00000260054 ABCG4Q9H172 646 aa15.24■□□□□ 0.03
CCDC90B-201ENST00000260054 NOL11Q9H8H0 719 aaKnown RBP15.24■□□□□ 0.03
CCDC90B-201ENST00000260054 IPPKQ9H8X2 491 aa15.24■□□□□ 0.03
CCDC90B-201ENST00000260054 ANGPTL3Q9Y5C1 460 aa15.24■□□□□ 0.03
CCDC90B-201ENST00000260054 A0A1B0GTL3 188 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 E7EQ34 232 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 MATN2O00339 956 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 OR7A17O14581 309 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 CAPN5O15484 640 aaPredicted RBP15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 PRAMEF4O60810 478 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 GP1BAP07359 652 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 LSSP48449 732 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 GYS2P54840 703 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 GUCY1A3Q02108 690 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 PRDX1Q06830 199 aaKnown RBP15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 SF1Q15637 639 aaKnown RBP15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 PRAMEF9Q5VWM5 478 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 IRGCQ6NXR0 463 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 SPESP1Q6UW49 350 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 OR52B6Q8NGF0 335 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 CKAP2Q8WWK9 683 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 NUDT22Q9BRQ3 303 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 RAB33BQ9H082 229 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 LRRN3Q9H3W5 708 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 ZNF395Q9H8N7 513 aaPredicted RBP15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 CUEDC1Q9NWM3 386 aaPredicted RBP15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 TMEM9Q9P0T7 183 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 EPHA6Q9UF33 1036 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 ATXN7L1Q9ULK2 861 aaPredicted RBP15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 KCNE2Q9Y6J6 123 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 UNC13CQ8NB66 2214 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 PCM1Q15154 2024 aa15.23■□□□□ 0.03
CCDC90B-201ENST00000260054 IGKV1-8A0A0C4DH67 115 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 UBFD1O14562 309 aaKnown RBP15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 ZW10O43264 779 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 ITM2AO43736 263 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 NPHS1O60500 1241 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 H2AFYO75367 372 aaKnown RBP15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 CHRNGP07510 517 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 PIK3CGP48736 1102 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 BST1Q10588 318 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 SQSTM1Q13501 440 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 RCN2Q14257 317 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 CATSPEREQ5SY80 951 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 KIAA1614Q5VZ46 1190 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 TMPRSS9Q7Z410 1059 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 C17orf64Q86WR6 236 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 LSMEM2Q8N112 164 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 DCBLD1Q8N8Z6 715 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 DEFB124Q8NES8 71 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 NETO1Q8TDF5 533 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 SLC5A11Q8WWX8 675 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 ZNF75CPQ92670 426 aaPredicted RBP15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 CNDP1Q96KN2 507 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 TGM7Q96PF1 710 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 C20orf27Q9GZN8 174 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 DRC3Q9H069 523 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 MANSC1Q9H8J5 431 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 SLC6A20Q9NP91 592 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 MRPS30Q9NP92 439 aaKnown RBP15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 GPRC5BQ9NZH0 403 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 KLHL20Q9Y2M5 609 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 DYRK1BQ9Y463 629 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 SNRNP200O75643 2136 aaKnown RBP15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 KIF1CO43896 1103 aaKnown RBP15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 KATNA1O75449 491 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 LYPLA1O75608 230 aaPredicted RBP15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 CDH1P12830 882 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 HOXB3P14651 431 aaPredicted RBP15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 GNAZP19086 355 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 GRK2P25098 689 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 CMPK1P30085 196 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 MDH1P40925 334 aaKnown RBP15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 ABATP80404 500 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 LCP2Q13094 533 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 TRAF3Q13114 568 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 STX3Q13277 289 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 SLC5A12Q1EHB4 618 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 ARL13AQ5H913 290 aaPredicted RBP15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 FAM219BQ5XKK7 198 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 TTC19Q6DKK2 380 aaPredicted RBP15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 WDR74Q6RFH5 385 aaPredicted RBP15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 SLCO4C1Q6ZQN7 724 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 FAM92BQ6ZTR7 304 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 TMPRSS11BQ86T26 416 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 TRIM42Q8IWZ5 723 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 RAB3IL1Q8TBN0 382 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 CDK15Q96Q40 435 aa15.22■□□□□ 0.03
CCDC90B-201ENST00000260054 MAP3K3Q99759 626 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms