RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ZNF566Q969W8 418 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 RHBDF1Q96CC6 855 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 TBCDQ9BTW9 1192 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 BPIFA1Q9NP55 256 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 SLCO3A1Q9UIG8 710 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.52■□□□□ 0.24
FOXA1-201ENST00000250448 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.52■□□□□ 0.24
FOXA1-201ENST00000250448 E5RI56 91 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 EIF3FO00303 357 aaPredicted RBP16.52■□□□□ 0.24
FOXA1-201ENST00000250448 BCKDKO14874 412 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 PFDN6O15212 129 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 SLC22A1O15245 554 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 AQP9O43315 295 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 SLC2A4P14672 509 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 PRKACGP22612 351 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 RYKP34925 604 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 TRPC1P48995 793 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 GTF2H2Q13888 395 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 PTGR1Q14914 329 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 ACOX1Q15067 660 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 PCBP2Q15366 365 aaKnown RBP eCLIP16.52■□□□□ 0.241e-7■■■□□ 17.8
FOXA1-201ENST00000250448 RETSATQ6NUM9 610 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 GTF2H2CQ6P1K8 395 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 NCEH1Q6PIU2 408 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 MSRB3Q8IXL7 192 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 MICU2Q8IYU8 434 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 ZCCHC7Q8N3Z6 543 aaKnown RBP16.52■□□□□ 0.24
FOXA1-201ENST00000250448 PAF1Q8N7H5 531 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 OR52E4Q8NGH9 312 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 CNIH3Q8TBE1 160 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 NCLNQ969V3 563 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 PPP3R2Q96LZ3 170 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 PSD2Q9BQI7 771 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 ORC6Q9Y5N6 252 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 GOLGA8CPA6NN73 597 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 A8MX80 341 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 SLC16A6O15403 523 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 MAN1A2O60476 641 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 ALOX5P09917 674 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 PSMA3P25788 255 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 EMX1Q04741 257 aaPredicted RBP16.52■□□□□ 0.24
FOXA1-201ENST00000250448 PON2Q15165 354 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 MAPKAPK3Q16644 382 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 FAM174BQ3ZCQ3 159 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 INO80DQ53TQ3 878 aaPredicted RBP16.52■□□□□ 0.24
FOXA1-201ENST00000250448 MPP7Q5T2T1 576 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 MFSD4AQ8N468 514 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 KCNJ9Q92806 393 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 ASIC4Q96FT7 647 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 ATP13A3Q9H7F0 1226 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 SLC25A37Q9NYZ2 338 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 TMEFF2Q9UIK5 374 aaPredicted RBP16.52■□□□□ 0.24
FOXA1-201ENST00000250448 TSR3Q9UJK0 312 aaKnown RBP16.52■□□□□ 0.24
FOXA1-201ENST00000250448 PCDHGB1Q9Y5G3 927 aa16.52■□□□□ 0.24
FOXA1-201ENST00000250448 ZNF197O14709 1029 aa16.52■□□□□ 0.23
FOXA1-201ENST00000250448 XPNPEP2O43895 674 aa16.52■□□□□ 0.23
FOXA1-201ENST00000250448 ZNF821O75541 412 aaPredicted RBP16.52■□□□□ 0.23
FOXA1-201ENST00000250448 ALPIP09923 528 aa16.52■□□□□ 0.23
FOXA1-201ENST00000250448 LPOP22079 712 aaPredicted RBP16.52■□□□□ 0.23
FOXA1-201ENST00000250448 IL5RAQ01344 420 aa16.52■□□□□ 0.23
FOXA1-201ENST00000250448 CDK5R2Q13319 367 aa16.52■□□□□ 0.23
FOXA1-201ENST00000250448 RFX4Q33E94 735 aa16.52■□□□□ 0.23
FOXA1-201ENST00000250448 ZRANB3Q5FWF4 1079 aa16.52■□□□□ 0.23
FOXA1-201ENST00000250448 PDE12Q6L8Q7 609 aaKnown RBP16.52■□□□□ 0.23
FOXA1-201ENST00000250448 CCDC80Q76M96 950 aa16.52■□□□□ 0.23
FOXA1-201ENST00000250448 DCP2Q8IU60 420 aaKnown RBP16.52■□□□□ 0.23
FOXA1-201ENST00000250448 NDNFQ8TB73 568 aa16.52■□□□□ 0.23
FOXA1-201ENST00000250448 MCOLN3Q8TDD5 553 aa16.52■□□□□ 0.23
FOXA1-201ENST00000250448 FBLIM1Q8WUP2 373 aa16.52■□□□□ 0.23
FOXA1-201ENST00000250448 LMLNQ96KR4 655 aa16.52■□□□□ 0.23
FOXA1-201ENST00000250448 TRIT1Q9H3H1 467 aaKnown RBP16.52■□□□□ 0.23
FOXA1-201ENST00000250448 MAGIXQ9H6Y5 334 aa16.52■□□□□ 0.23
FOXA1-201ENST00000250448 ITGB1BP2Q9UKP3 347 aa16.52■□□□□ 0.23
FOXA1-201ENST00000250448 EIF3LQ9Y262 564 aaKnown RBP16.52■□□□□ 0.23
FOXA1-201ENST00000250448 TNPO3Q9Y5L0 923 aaKnown RBP16.52■□□□□ 0.23
FOXA1-201ENST00000250448 M0R3G1 203 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 IFITM3Q01628 133 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 MESP2Q0VG99 397 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 TRAF3Q13114 568 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 SMUG1Q53HV7 270 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 GPR149Q86SP6 731 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 SNX29P2Q8IUI4 249 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 RORBQ92753 470 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 HEPHQ9BQS7 1158 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 BRWD1Q9NSI6 2320 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 DCAF13Q9NV06 445 aaKnown RBP16.51■□□□□ 0.23
FOXA1-201ENST00000250448 HTR3EA5X5Y0 456 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 NADKO95544 446 aaPredicted RBP16.51■□□□□ 0.23
FOXA1-201ENST00000250448 ANGPTL1O95841 491 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 OTCP00480 354 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 S100BP04271 92 aaPredicted RBP16.51■□□□□ 0.23
FOXA1-201ENST00000250448 RETP07949 1114 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 ITGAMP11215 1152 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 SRCP12931 536 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 PFKLP17858 780 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 ADPRMQ3LIE5 342 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 ZC3H12BQ5HYM0 836 aaKnown RBP16.51■□□□□ 0.23
FOXA1-201ENST00000250448 FAM78AQ5JUQ0 283 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 SPANXN4Q5MJ08 99 aa16.51■□□□□ 0.23
FOXA1-201ENST00000250448 TMEM215Q68D42 235 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms