RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 GRIK2Q13002 908 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 CDH18Q13634 790 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 TPRG1LQ5T0D9 272 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.4■□□□□ 0.22
SGPP1-201ENST00000247225 ZNF551Q7Z340 670 aaPredicted RBP16.4■□□□□ 0.22
SGPP1-201ENST00000247225 BEND7Q8N7W2 519 aaPredicted RBP16.4■□□□□ 0.22
SGPP1-201ENST00000247225 SCAIQ8N9R8 606 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 COPS8Q99627 209 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 TMEM121BQ9BXQ6 578 aaPredicted RBP16.4■□□□□ 0.22
SGPP1-201ENST00000247225 CD244Q9BZW8 370 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 RGS17Q9UGC6 210 aaPredicted RBP16.4■□□□□ 0.22
SGPP1-201ENST00000247225 MYO10Q9HD67 2058 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 ARNTLO00327 626 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 KPNA5O15131 536 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 ADAM12O43184 909 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 CLDN9O95484 217 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 CDH12P55289 794 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 FCGRTP55899 365 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 UBE3AQ05086 875 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 PLD1Q13393 1074 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 ZNF404Q494X3 552 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 LDLRAD1Q5T700 205 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 ADNP2Q6IQ32 1131 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 TAS1R1Q7RTX1 841 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 MFSD4AQ8N468 514 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 MGME1Q9BQP7 344 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 CEP44Q9C0F1 390 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 TP63Q9H3D4 680 aaPredicted RBP16.4■□□□□ 0.22
SGPP1-201ENST00000247225 PPT2Q9UMR5 302 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 PCDHB8Q9UN66 801 aa16.4■□□□□ 0.22
SGPP1-201ENST00000247225 GNG14A0A1W2PPG7 69 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 SLC28A1O00337 649 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 TLL1O43897 1013 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 HIST1H2AGP0C0S8 130 aaPredicted RBP16.39■□□□□ 0.21
SGPP1-201ENST00000247225 AKR1A1P14550 325 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 HIST1H2ADP20671 130 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 ITGALP20701 1170 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 DGKAP23743 735 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 ABRQ12979 859 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 KIAA1841Q6NSI8 718 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 CCBE1Q6UXH8 406 aaPredicted RBP16.39■□□□□ 0.21
SGPP1-201ENST00000247225 TMC5Q6UXY8 1006 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 UBE2R2Q712K3 238 aaPredicted RBP16.39■□□□□ 0.21
SGPP1-201ENST00000247225 ZBTB2Q8N680 514 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 OR5AK3PQ8NH89 298 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 HIST1H2AHQ96KK5 128 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 SPATA17Q96L03 361 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 IL4I1Q96RQ9 567 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 HIST1H2AJQ99878 128 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 H2AFJQ9BTM1 129 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 TRIT1Q9H3H1 467 aaKnown RBP16.39■□□□□ 0.21
SGPP1-201ENST00000247225 DNMT3BQ9UBC3 853 aaKnown RBP16.39■□□□□ 0.21
SGPP1-201ENST00000247225 PLXNA1Q9UIW2 1896 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 CTDSP2O14595 271 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 GABARAPO95166 117 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 EPN2O95208 641 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 SLC10A3P09131 477 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 TGM1P22735 817 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 PBLDP30039 288 aaPredicted RBP16.39■□□□□ 0.21
SGPP1-201ENST00000247225 GJA8P48165 433 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 KCNA10Q16322 511 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 SZRD1Q7Z422 152 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 TSPAN18Q96SJ8 248 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 NUAK2Q9H093 628 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 SLC6A14Q9UN76 642 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 RNF6Q9Y252 685 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 A0A0C4DFX4 3053 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 TTC34A8MYJ7 566 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 SLC35A2P78381 396 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 CACNG1Q06432 222 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 PTCHD3Q3KNS1 767 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 CLLU1OSQ5K130 101 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 GPR149Q86SP6 731 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 SVOPQ8N4V2 548 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 OR4K1Q8NGD4 311 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 FEVQ99581 238 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 CENPOQ9BU64 300 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 MAGEH1Q9H213 219 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 DNMT3LQ9UJW3 386 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 DUSP12Q9UNI6 340 aa16.39■□□□□ 0.21
SGPP1-201ENST00000247225 HPRP00739 348 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 ANXA5P08758 320 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 CCDC159P0C7I6 412 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 OR1D2P34982 312 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 TGM4P49221 684 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 IRAK1BP1Q5VVH5 260 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 TCAIMQ8N3R3 496 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 C2orf73Q8N5S3 287 aaPredicted RBP16.38■□□□□ 0.21
SGPP1-201ENST00000247225 DYNC2LI1Q8TCX1 351 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 RLIMQ9NVW2 624 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 PDCD11Q14690 1871 aaKnown RBP16.38■□□□□ 0.21
SGPP1-201ENST00000247225 PDZK1P1A8MUH7 402 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 TAF4O00268 1085 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 AP3D1O14617 1153 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 MAPKAPK2P49137 400 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 NPRL3Q12980 569 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 CAMK2GQ13555 558 aaPredicted RBP16.38■□□□□ 0.21
SGPP1-201ENST00000247225 MAD2L1BPQ15013 274 aaPredicted RBP16.38■□□□□ 0.21
SGPP1-201ENST00000247225 AADATQ8N5Z0 425 aa16.38■□□□□ 0.21
SGPP1-201ENST00000247225 IL26Q9NPH9 171 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms