RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CCDC168Q8NDH2 2452 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 CCDC120Q96HB5 630 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 TBL1YQ9BQ87 522 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 GORASP1Q9BQQ3 440 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 RHOXF2Q9BQY4 288 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 FAM129AQ9BZQ8 928 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 DPH5Q9H2P9 285 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 ZNF160Q9HCG1 818 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 SUCOQ9UBS9 1254 aaKnown RBP13.23□□□□□ -0.29
DDX39A-201ENST00000242776 CTSFQ9UBX1 484 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 PLCL2Q9UPR0 1127 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 SNX24Q9Y343 169 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 MAU2Q9Y6X3 613 aa13.23□□□□□ -0.29
DDX39A-201ENST00000242776 DCHS2Q6V1P9 2916 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 UQCRHP07919 91 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 PEBP1P30086 187 aaKnown RBP13.22□□□□□ -0.29
DDX39A-201ENST00000242776 MC4RP32245 332 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 SHMT2P34897 504 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 GRIA3P42263 894 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 RPL21P46778 160 aaKnown RBP13.22□□□□□ -0.29
DDX39A-201ENST00000242776 OR1D4P47884 311 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 TERF1P54274 439 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 CSE1LP55060 971 aaKnown RBP13.22□□□□□ -0.29
DDX39A-201ENST00000242776 ART3Q13508 389 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 NKG7Q16617 165 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 VWA2Q5GFL6 755 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 RNASEH2BQ5TBB1 312 aaKnown RBP13.22□□□□□ -0.29
DDX39A-201ENST00000242776 B3GNTL1Q67FW5 361 aaPredicted RBP13.22□□□□□ -0.29
DDX39A-201ENST00000242776 KCTD11Q693B1 232 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 ISLR2Q6UXK2 745 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 COX15Q7KZN9 410 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 OVCH1Q7RTY7 1134 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 IFT20Q8IY31 132 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 FLVCR1-AS1Q8TAF5 88 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 ULK4Q96C45 1275 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 C8orf44Q96CB5 159 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 TAAR6Q96RI8 345 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 EURLQ9NYK6 297 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 PTGFRNQ9P2B2 879 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 ANAPC5Q9UJX4 755 aa13.22□□□□□ -0.29
DDX39A-201ENST00000242776 ITPR3Q14573 2671 aa13.21□□□□□ -0.29
DDX39A-201ENST00000242776 C17orf113A0A1B0GUU1 675 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 A0A1B0GX78 115 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 SUN1O94901 812 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 UNC5CO95185 931 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 TPBGLP0DKB5 382 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 MAGP20916 626 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 IVDP26440 423 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 CD151P48509 253 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 TDGF1P3P51864 188 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 ITGA8P53708 1063 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 CUL1Q13616 776 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 SPARCL1Q14515 664 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 SNX20Q7Z614 316 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 SERPINA9Q86WD7 417 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 MCATQ8IVS2 390 aaKnown RBP13.21□□□□□ -0.3
DDX39A-201ENST00000242776 NAT8LQ8N9F0 302 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 OR11G2Q8NGC1 345 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 RELTQ969Z4 430 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 SPSB2Q99619 263 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 VPS37BQ9H9H4 285 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 ZDHHC3Q9NYG2 299 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 DMGDHQ9UI17 866 aaKnown RBP13.21□□□□□ -0.3
DDX39A-201ENST00000242776 ZFHX3Q15911 3703 aa13.21□□□□□ -0.3
DDX39A-201ENST00000242776 PCDH17O14917 1159 aa13.2□□□□□ -0.3
DDX39A-201ENST00000242776 KRTAP10-9P60411 292 aa13.2□□□□□ -0.3
DDX39A-201ENST00000242776 CDH17Q12864 832 aa13.2□□□□□ -0.3
DDX39A-201ENST00000242776 MFAP5Q13361 173 aa13.2□□□□□ -0.3
DDX39A-201ENST00000242776 KCTD19Q17RG1 926 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-201ENST00000242776 ZNF658BQ4V348 819 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-201ENST00000242776 HIBCHQ6NVY1 386 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-201ENST00000242776 TMEM207Q6UWW9 146 aa13.2□□□□□ -0.3
DDX39A-201ENST00000242776 BNC2Q6ZN30 1099 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-201ENST00000242776 SIRT6Q8N6T7 355 aa13.2□□□□□ -0.3
DDX39A-201ENST00000242776 AMER2Q8N7J2 671 aa13.2□□□□□ -0.3
DDX39A-201ENST00000242776 DNAAF3Q8N9W5 541 aa13.2□□□□□ -0.3
DDX39A-201ENST00000242776 MCUQ8NE86 351 aa13.2□□□□□ -0.3
DDX39A-201ENST00000242776 ELMO1Q92556 727 aa13.2□□□□□ -0.3
DDX39A-201ENST00000242776 DLG3Q92796 817 aa13.2□□□□□ -0.3
DDX39A-201ENST00000242776 DNAJC1Q96KC8 554 aaKnown RBP13.2□□□□□ -0.3
DDX39A-201ENST00000242776 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.2□□□□□ -0.34e-7■□□□□ 10.9
DDX39A-201ENST00000242776 XAB2Q9HCS7 855 aaKnown RBP13.2□□□□□ -0.3
DDX39A-201ENST00000242776 CUTCQ9NTM9 273 aa13.2□□□□□ -0.3
DDX39A-201ENST00000242776 STOX2Q9P2F5 926 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-201ENST00000242776 KLF2Q9Y5W3 355 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-201ENST00000242776 PRSS21Q9Y6M0 314 aa13.2□□□□□ -0.3
DDX39A-201ENST00000242776 TACC2O95359 2948 aa13.2□□□□□ -0.3
DDX39A-201ENST00000242776 ESYT3A0FGR9 886 aa13.19□□□□□ -0.3
DDX39A-201ENST00000242776 CRTAMO95727 393 aa13.19□□□□□ -0.3
DDX39A-201ENST00000242776 MLNP12872 115 aa13.19□□□□□ -0.3
DDX39A-201ENST00000242776 ADRA1AP35348 466 aa13.19□□□□□ -0.3
DDX39A-201ENST00000242776 PTGER4P35408 488 aa13.19□□□□□ -0.3
DDX39A-201ENST00000242776 ZNF140P52738 457 aaPredicted RBP13.19□□□□□ -0.3
DDX39A-201ENST00000242776 ANKRD22Q5VYY1 191 aa13.19□□□□□ -0.3
DDX39A-201ENST00000242776 FCRL6Q6DN72 434 aa13.19□□□□□ -0.3
DDX39A-201ENST00000242776 LRRC8BQ6P9F7 803 aa13.19□□□□□ -0.3
DDX39A-201ENST00000242776 NR4A3Q92570 626 aa13.19□□□□□ -0.3
DDX39A-201ENST00000242776 FKBP10Q96AY3 582 aa13.19□□□□□ -0.3
DDX39A-201ENST00000242776 CRB3Q9BUF7 120 aa13.19□□□□□ -0.3
DDX39A-201ENST00000242776 TRIM8Q9BZR9 551 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms