RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 UPK1AO00322 258 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 PLK4O00444 970 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 SLC9A3R1O14745 358 aaPredicted RBP12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 PSIP1O75475 530 aaKnown RBP12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 C1QCP02747 245 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 JUPP14923 745 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 PRPH2P23942 346 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 PTPN6P29350 595 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 PDHA2P29803 388 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 PBLDP30039 288 aaPredicted RBP12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 CDKN2CP42773 168 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 SLC6A11P48066 632 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 PGS1Q32NB8 556 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 ADNP2Q6IQ32 1131 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 SLC30A9Q6PML9 568 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 GCNT7Q6ZNI0 430 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 TRIM74Q86UV6 250 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 THOC6Q86W42 341 aaKnown RBP12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 SFTPA1Q8IWL2 248 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 CELF5Q8N6W0 485 aaKnown RBP12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 VN1R2Q8NFZ6 395 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 MAGEE2Q8TD90 523 aaPredicted RBP12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 OSCP1Q8WVF1 389 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 TIFAQ96CG3 184 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 OR4K3Q96R72 315 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 EBPLQ9BY08 206 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 LMAN2LQ9H0V9 348 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 RBM38Q9H0Z9 239 aaKnown RBP12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 NKX2-4Q9H2Z4 354 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 NDUFA13Q9P0J0 144 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 MSRAQ9UJ68 235 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 UTS2RQ9UKP6 389 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 INVSQ9Y283 1065 aa12.09□□□□□ -0.47
UBASH3A-209ENST00000635325 CROCCQ5TZA2 2017 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 GSTA4O15217 222 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 CLOCKO15516 846 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 SRPRAP08240 638 aaKnown RBP12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 ZNF23P17027 643 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 HOXB9P17482 250 aaPredicted RBP12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 AMD1P17707 334 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 MAP4P27816 1152 aaKnown RBP12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 S100A3P33764 101 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 RPS9P46781 194 aaKnown RBP12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 PRLHRP49683 370 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 CDH15P55291 814 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 TMEM115Q12893 351 aaPredicted RBP12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 SLC36A3Q495N2 470 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 XKR6Q5GH73 641 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 LDLRAP1Q5SW96 308 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 AP1ARQ63HQ0 302 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 TMEM214Q6NUQ4 689 aaKnown RBP12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 ERAP2Q6P179 960 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 FBXO30Q8TB52 745 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 CYGBQ8WWM9 190 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 TMEM159Q96B96 161 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 NMD3Q96D46 503 aaKnown RBP12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 MED8Q96G25 268 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 RMND5BQ96G75 393 aaPredicted RBP12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 LRIG1Q96JA1 1093 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 VPS35Q96QK1 796 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 MTERF1Q99551 399 aaKnown RBP12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 FAM83CQ9BQN1 747 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 CPPED1Q9BRF8 314 aaPredicted RBP12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 KAT8Q9H7Z6 458 aaKnown RBP12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 GORASP2Q9H8Y8 452 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 GPRC5BQ9NZH0 403 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 STOX2Q9P2F5 926 aaPredicted RBP12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 GULP1Q9UBP9 304 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 PADI4Q9UM07 663 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 MYRFQ9Y2G1 1151 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 MAGED1Q9Y5V3 778 aaPredicted RBP12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 TRANK1O15050 2925 aa12.08□□□□□ -0.48
UBASH3A-209ENST00000635325 A0A096LPI6 279 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 SLC5A10A0PJK1 596 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 WNT9AO14904 365 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 HOXC11O43248 304 aaPredicted RBP12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 ATG13O75143 517 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 SNAP29O95721 258 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 SLC16A8O95907 504 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 SOD1P00441 154 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 RAP2AP10114 183 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 PRPS2P11908 318 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 MYF6P23409 242 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 IRF8Q02556 426 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 NAE1Q13564 534 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 DDX39BQ13838 428 aaKnown RBP12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 DOC2AQ14183 400 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 SF1Q15637 639 aaKnown RBP12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 CYBRD1Q53TN4 286 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 OTUD3Q5T2D3 398 aaPredicted RBP12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 NAIF1Q69YI7 327 aaPredicted RBP12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 NOXRED1Q6NXP6 359 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 TMEM220Q6QAJ8 160 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 AGTRAPQ6RW13 159 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 TMC5Q6UXY8 1006 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 ZFP28Q8NHY6 868 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 GLMNQ92990 594 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 ERLEC1Q96DZ1 483 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 COQ10AQ96MF6 247 aa12.07□□□□□ -0.48
UBASH3A-209ENST00000635325 CCM2Q9BSQ5 444 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 489 ms