RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 ACAT2Q9BWD1 397 aa10.24□□□□□ -0.77
TUBE1-210ENST00000604967 TSSK1BQ9BXA7 367 aa10.24□□□□□ -0.77
TUBE1-210ENST00000604967 SMYD2Q9NRG4 433 aa10.24□□□□□ -0.77
TUBE1-210ENST00000604967 ENAMQ9NRM1 1142 aa10.24□□□□□ -0.77
TUBE1-210ENST00000604967 TCFL5Q9UL49 500 aa10.24□□□□□ -0.77
TUBE1-210ENST00000604967 CCDC88CQ9P219 2028 aa10.24□□□□□ -0.77
TUBE1-210ENST00000604967 OR2A25A4D2G3 310 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 E7ENX8 843 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 E7ESA3 106 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 H3BMM5 538 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 KPNA5O15131 536 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 ZSCAN9O15535 394 aaPredicted RBP10.23□□□□□ -0.77
TUBE1-210ENST00000604967 SUV39H1O43463 412 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 MT-ND3P03897 115 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 UMODP07911 640 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 RAB40ALP0C0E4 278 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 IMPA1P29218 277 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 SKIV2L2P42285 1042 aaKnown RBP10.23□□□□□ -0.77
TUBE1-210ENST00000604967 CCR10P46092 362 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 EFNA3P52797 238 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 TAP2Q03519 686 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 C2orf54Q08AI8 447 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 CBLBQ13191 982 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 NCF4Q15080 339 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 SF1Q15637 639 aaKnown RBP10.23□□□□□ -0.77
TUBE1-210ENST00000604967 PHKG1Q16816 387 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 SPANXN3Q5MJ09 141 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 UBAP2Q5T6F2 1119 aaKnown RBP10.23□□□□□ -0.77
TUBE1-210ENST00000604967 PAQR3Q6TCH7 311 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 ZNF605Q86T29 641 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 SPATA4Q8NEY3 305 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 APOBEC4Q8WW27 367 aaKnown RBP10.23□□□□□ -0.77
TUBE1-210ENST00000604967 INPP5DQ92835 1189 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 CLIP3Q96DZ5 547 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 CERS2Q96G23 380 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 CFAP36Q96G28 342 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 ARHGAP9Q9BRR9 750 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 EFHD1Q9BUP0 239 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 GPR87Q9BY21 358 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 NLNQ9BYT8 704 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 TRIM4Q9C037 500 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 SLC25A18Q9H1K4 315 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 SYTL2Q9HCH5 934 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 CUEDC1Q9NWM3 386 aaPredicted RBP10.23□□□□□ -0.77
TUBE1-210ENST00000604967 KLHL42Q9P2K6 505 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 SERTAD3Q9UJW9 196 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 KCND3Q9UK17 655 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 TLK1Q9UKI8 766 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 SLC39A10Q9ULF5 831 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 PLCL2Q9UPR0 1127 aa10.23□□□□□ -0.77
TUBE1-210ENST00000604967 FLNCQ14315 2725 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 FITM1A5D6W6 292 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 CXorf49A8MYA2 514 aaPredicted RBP10.22□□□□□ -0.77
TUBE1-210ENST00000604967 F8W8V4 182 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 P2RX6O15547 441 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 RECKO95980 971 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 RPN2P04844 631 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 GMPRP36959 345 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 PMS2P54278 862 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 PNLIPRP1P54315 467 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 ATP1A4Q13733 1029 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 ZNF460Q14592 562 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 NKAIN1Q4KMZ8 207 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 ZNF425Q6IV72 752 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 MRPL14Q6P1L8 145 aaKnown RBP10.22□□□□□ -0.77
TUBE1-210ENST00000604967 ZDHHC24Q6UX98 284 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 SYT10Q6XYQ8 523 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 SYDE1Q6ZW31 735 aaPredicted RBP10.22□□□□□ -0.77
TUBE1-210ENST00000604967 NEK10Q6ZWH5 1172 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 RNF44Q7L0R7 432 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 SYVN1Q86TM6 617 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 PAQR7Q86WK9 346 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 PLD3Q8IV08 490 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 METTL27Q8N6F8 245 aaPredicted RBP10.22□□□□□ -0.77
TUBE1-210ENST00000604967 FBXO15Q8NCQ5 510 aaPredicted RBP10.22□□□□□ -0.77
TUBE1-210ENST00000604967 SNF8Q96H20 258 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 C10orf90Q96M02 699 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 CATSPER2Q96P56 530 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 FAM167BQ9BTA0 163 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 DPH7Q9BTV6 452 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 FANCEQ9HB96 536 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 SPATA7Q9P0W8 599 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 ZC3H7BQ9UGR2 993 aaKnown RBP10.22□□□□□ -0.77
TUBE1-210ENST00000604967 PDE10AQ9Y233 779 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 POLHQ9Y253 713 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 TP53TG5Q9Y2B4 290 aa10.22□□□□□ -0.77
TUBE1-210ENST00000604967 TNRC6AQ8NDV7 1962 aaKnown RBP10.22□□□□□ -0.77
TUBE1-210ENST00000604967 A0A0J9YVX5 310 aa10.21□□□□□ -0.77
TUBE1-210ENST00000604967 CTAGE15A4D2H0 777 aa10.21□□□□□ -0.77
TUBE1-210ENST00000604967 ARGFXA6NJG6 315 aa10.21□□□□□ -0.77
TUBE1-210ENST00000604967 EFCAB8A8MWE9 144 aa10.21□□□□□ -0.77
TUBE1-210ENST00000604967 E5RI56 91 aa10.21□□□□□ -0.77
TUBE1-210ENST00000604967 CCDC188H7C350 402 aa10.21□□□□□ -0.77
TUBE1-210ENST00000604967 WISP3O95389 354 aaPredicted RBP10.21□□□□□ -0.77
TUBE1-210ENST00000604967 TTC4O95801 387 aa10.21□□□□□ -0.77
TUBE1-210ENST00000604967 ONECUT2O95948 504 aa10.21□□□□□ -0.77
TUBE1-210ENST00000604967 STATHP02808 62 aa10.21□□□□□ -0.77
TUBE1-210ENST00000604967 MPC1LP0DKB6 136 aa10.21□□□□□ -0.77
TUBE1-210ENST00000604967 FDXRP22570 491 aa10.21□□□□□ -0.77
TUBE1-210ENST00000604967 CCNFP41002 786 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms