RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 SEMA3GQ9NS98 782 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 CTSFQ9UBX1 484 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 GNPTGQ9UJJ9 305 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 CSAG2Q9Y5P2 127 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 FAM169AQ9Y6X4 670 aa21.7■■□□□ 1.06
SSBP4-203ENST00000593641 CELSR2Q9HCU4 2923 aa21.69■■□□□ 1.06
SSBP4-203ENST00000593641 TARM1B6A8C7 271 aa21.69■■□□□ 1.06
SSBP4-203ENST00000593641 APRTP07741 180 aa21.69■■□□□ 1.06
SSBP4-203ENST00000593641 KIRREL2Q6UWL6 708 aa21.69■■□□□ 1.06
SSBP4-203ENST00000593641 LDB1Q86U70 411 aaPredicted RBP21.69■■□□□ 1.06
SSBP4-203ENST00000593641 CCDC89Q8N998 374 aa21.69■■□□□ 1.06
SSBP4-203ENST00000593641 DNAJB14Q8TBM8 379 aa21.69■■□□□ 1.06
SSBP4-203ENST00000593641 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.69■■□□□ 1.06
SSBP4-203ENST00000593641 LHPPQ9H008 270 aa21.69■■□□□ 1.06
SSBP4-203ENST00000593641 KPNA5O15131 536 aa21.68■■□□□ 1.06
SSBP4-203ENST00000593641 DCTP40126 519 aa21.68■■□□□ 1.06
SSBP4-203ENST00000593641 OR1D4P47884 311 aa21.68■■□□□ 1.06
SSBP4-203ENST00000593641 VSX2P58304 361 aaPredicted RBP21.68■■□□□ 1.06
SSBP4-203ENST00000593641 IGFL2Q6UWQ7 119 aa21.68■■□□□ 1.06
SSBP4-203ENST00000593641 OTOAQ7RTW8 1153 aa21.68■■□□□ 1.06
SSBP4-203ENST00000593641 PARP9Q8IXQ6 854 aa21.68■■□□□ 1.06
SSBP4-203ENST00000593641 CNDP1Q96KN2 507 aa21.68■■□□□ 1.06
SSBP4-203ENST00000593641 FOPNLQ96NB1 174 aa21.68■■□□□ 1.06
SSBP4-203ENST00000593641 ZNF285Q96NJ3 590 aa21.68■■□□□ 1.06
SSBP4-203ENST00000593641 ENAMQ9NRM1 1142 aa21.68■■□□□ 1.06
SSBP4-203ENST00000593641 PAK5Q9P286 719 aa21.68■■□□□ 1.06
SSBP4-203ENST00000593641 TTC7AQ9ULT0 858 aaPredicted RBP21.68■■□□□ 1.06
SSBP4-203ENST00000593641 CAPN6Q9Y6Q1 641 aa21.68■■□□□ 1.06
SSBP4-203ENST00000593641 MAU2Q9Y6X3 613 aa21.68■■□□□ 1.06
SSBP4-203ENST00000593641 HEATR5BQ9P2D3 2071 aa21.68■■□□□ 1.06
SSBP4-203ENST00000593641 FITM1A5D6W6 292 aa21.67■■□□□ 1.06
SSBP4-203ENST00000593641 CD3EAPO15446 510 aaKnown RBP21.67■■□□□ 1.06
SSBP4-203ENST00000593641 SRPX2O60687 465 aaPredicted RBP21.67■■□□□ 1.06
SSBP4-203ENST00000593641 TSFMP43897 325 aaKnown RBP21.67■■□□□ 1.06
SSBP4-203ENST00000593641 BDKRB1P46663 353 aa21.67■■□□□ 1.06
SSBP4-203ENST00000593641 OCA2Q04671 838 aa21.67■■□□□ 1.06
SSBP4-203ENST00000593641 CDC16Q13042 620 aa21.67■■□□□ 1.06
SSBP4-203ENST00000593641 ZNF169Q14929 603 aaPredicted RBP21.67■■□□□ 1.06
SSBP4-203ENST00000593641 B3GNTL1Q67FW5 361 aaPredicted RBP21.67■■□□□ 1.06
SSBP4-203ENST00000593641 DESI2Q9BSY9 194 aa21.67■■□□□ 1.06
SSBP4-203ENST00000593641 CRB3Q9BUF7 120 aa21.67■■□□□ 1.06
SSBP4-203ENST00000593641 CHRAC1Q9NRG0 131 aa21.67■■□□□ 1.06
SSBP4-203ENST00000593641 MARCH4Q9P2E8 410 aaPredicted RBP21.67■■□□□ 1.06
SSBP4-203ENST00000593641 HYKKA2RU49 373 aa21.66■■□□□ 1.06
SSBP4-203ENST00000593641 PRICKLE3O43900 615 aaPredicted RBP21.66■■□□□ 1.06
SSBP4-203ENST00000593641 ETS1P14921 441 aa21.66■■□□□ 1.06
SSBP4-203ENST00000593641 CCNFP41002 786 aa21.66■■□□□ 1.06
SSBP4-203ENST00000593641 CARSP49589 748 aaKnown RBP21.66■■□□□ 1.06
SSBP4-203ENST00000593641 TLR1Q15399 786 aa21.66■■□□□ 1.06
SSBP4-203ENST00000593641 PCID2Q5JVF3 399 aa21.66■■□□□ 1.06
SSBP4-203ENST00000593641 WASHC2DQ5SRD0 308 aa21.66■■□□□ 1.06
SSBP4-203ENST00000593641 KCNMB4Q86W47 210 aa21.66■■□□□ 1.06
SSBP4-203ENST00000593641 LRRC6Q86X45 466 aa21.66■■□□□ 1.06
SSBP4-203ENST00000593641 MPP5Q8N3R9 675 aa21.66■■□□□ 1.06
SSBP4-203ENST00000593641 OR11G2Q8NGC1 345 aa21.66■■□□□ 1.06
SSBP4-203ENST00000593641 MAGEC3Q8TD91 643 aa21.66■■□□□ 1.06
SSBP4-203ENST00000593641 C1orf54Q8WWF1 131 aa21.66■■□□□ 1.06
SSBP4-203ENST00000593641 THOC3Q96J01 351 aaKnown RBP21.66■■□□□ 1.06
SSBP4-203ENST00000593641 MIPEPQ99797 713 aa21.66■■□□□ 1.06
SSBP4-203ENST00000593641 ZNF304Q9HCX3 659 aa21.66■■□□□ 1.06
SSBP4-203ENST00000593641 A0A0U1RQJ8 604 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 VSTM2BA6NLU5 285 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 CTSVO60911 334 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 NDUFS3O75489 264 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 C1orf105O95561 183 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 ERVK-10P10266 1014 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 PSMB5P28074 263 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 SESN2P58004 480 aaPredicted RBP21.65■■□□□ 1.06
SSBP4-203ENST00000593641 SNX1Q13596 522 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 NAA25Q14CX7 972 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 PRMT9Q6P2P2 845 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 CNSTQ6PJW8 725 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 ISLR2Q6UXK2 745 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 PRUNE1Q86TP1 453 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 SLC13A5Q86YT5 568 aaPredicted RBP21.65■■□□□ 1.06
SSBP4-203ENST00000593641 OTUD6BQ8N6M0 293 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 OR2L3Q8NG85 312 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 GRHL3Q8TE85 626 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 MIEF2Q96C03 454 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 P2RY12Q9H244 342 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 ZNF282Q9UDV7 671 aaPredicted RBP21.65■■□□□ 1.06
SSBP4-203ENST00000593641 NFS1Q9Y697 457 aa21.65■■□□□ 1.06
SSBP4-203ENST00000593641 CROCCQ5TZA2 2017 aa21.64■■□□□ 1.05
SSBP4-203ENST00000593641 A0A0J9YVX5 310 aa21.64■■□□□ 1.05
SSBP4-203ENST00000593641 ENO4A6NNW6 628 aa21.64■■□□□ 1.05
SSBP4-203ENST00000593641 MAP2K7O14733 419 aa21.64■■□□□ 1.05
SSBP4-203ENST00000593641 EDN3P14138 238 aa21.64■■□□□ 1.05
SSBP4-203ENST00000593641 ACPPP15309 386 aa21.64■■□□□ 1.05
SSBP4-203ENST00000593641 EIF3BP55884 814 aaKnown RBP21.64■■□□□ 1.05
SSBP4-203ENST00000593641 PER3P56645 1201 aa21.64■■□□□ 1.05
SSBP4-203ENST00000593641 LINC00696Q6ZRV3 163 aa21.64■■□□□ 1.05
SSBP4-203ENST00000593641 DTWD1Q8N5C7 304 aa21.64■■□□□ 1.05
SSBP4-203ENST00000593641 HMGCLL1Q8TB92 370 aa21.64■■□□□ 1.05
SSBP4-203ENST00000593641 STT3BQ8TCJ2 826 aa21.64■■□□□ 1.05
SSBP4-203ENST00000593641 IL22Q9GZX6 179 aa21.64■■□□□ 1.05
SSBP4-203ENST00000593641 EIF2B3Q9NR50 452 aaKnown RBP21.64■■□□□ 1.05
SSBP4-203ENST00000593641 SPATA7Q9P0W8 599 aa21.64■■□□□ 1.05
SSBP4-203ENST00000593641 ZC3H7BQ9UGR2 993 aaKnown RBP21.64■■□□□ 1.05
SSBP4-203ENST00000593641 RUVBL2Q9Y230 463 aaKnown RBP21.64■■□□□ 1.05
SSBP4-203ENST00000593641 KLK4Q9Y5K2 254 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms