RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CAPN15O75808 1086 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 DDX6P26196 483 aaKnown RBP eCLIP12.76□□□□□ -0.371e-6■■■■■ 29.9
RNF43-208ENST00000584437 MAP2K5Q13163 448 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 FAM189A2Q15884 450 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 DUOXA1Q1HG43 343 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 ZNF181Q2M3W8 571 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 DUSP28Q4G0W2 176 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 KIAA1161Q6NSJ0 714 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 ZC3HC1Q86WB0 502 aaKnown RBP12.76□□□□□ -0.37
RNF43-208ENST00000584437 ZNF599Q96NL3 588 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 EFCAB11Q9BUY7 163 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 MKKSQ9NPJ1 570 aaPredicted RBP12.76□□□□□ -0.37
RNF43-208ENST00000584437 NEDD8-MDP1E9PL57 170 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 H7C2Y5 167 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 XPNPEP2O43895 674 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 ECI2O75521 394 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 CDRT1O95170 752 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 RENP00797 406 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 HK1P19367 917 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 RASGEF1BQ0VAM2 473 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 DNASE1L3Q13609 305 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 PLA2G4EQ3MJ16 856 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 ANKDD1AQ495B1 522 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 PAQR3Q6TCH7 311 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 MBOAT1Q6ZNC8 495 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 PAQR7Q86WK9 346 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 SLC22A17Q8WUG5 538 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 PCED1BQ96HM7 432 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 LIN28AQ9H9Z2 209 aaKnown RBP12.76□□□□□ -0.37
RNF43-208ENST00000584437 TREM1Q9NP99 234 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 P2RX2Q9UBL9 471 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 DCCP43146 1447 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 FXYD6-FXYD2A0A087WZ82 144 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 EVX2Q03828 476 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 TLR1Q15399 786 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 SPIN4Q56A73 249 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 MSANTD2Q6P1R3 559 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 TNFAIP8L2Q6P589 184 aaPredicted RBP12.76□□□□□ -0.37
RNF43-208ENST00000584437 NCEH1Q6PIU2 408 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 LRRC70Q7Z2Q7 622 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 LSM14AQ8ND56 463 aaKnown RBP12.76□□□□□ -0.37
RNF43-208ENST00000584437 PLD4Q96BZ4 506 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 PRICKLE1Q96MT3 831 aaPredicted RBP12.76□□□□□ -0.37
RNF43-208ENST00000584437 FXYD6Q9H0Q3 95 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 DPEP3Q9H4B8 488 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 NUDT15Q9NV35 164 aa12.76□□□□□ -0.37
RNF43-208ENST00000584437 AJAP1Q9UKB5 411 aaPredicted RBP12.76□□□□□ -0.37
RNF43-208ENST00000584437 ZFP37Q9Y6Q3 630 aaPredicted RBP12.76□□□□□ -0.37
RNF43-208ENST00000584437 H0YJX3 145 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 CREG1O75629 220 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 RAB36O95755 333 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 AGR2O95994 175 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 DLDP09622 509 aaKnown RBP12.75□□□□□ -0.37
RNF43-208ENST00000584437 ZNF3P17036 446 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 MEP1AQ16819 746 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 XKR4Q5GH76 650 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 GPR135Q8IZ08 494 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 COX18Q8N8Q8 333 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 GALNT6Q8NCL4 622 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 C7orf43Q8WVR3 580 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 MOCS1Q9NZB8 636 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 FBXW2Q9UKT8 454 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 LCN1P31025 176 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 SEMA3AQ14563 771 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 RAB12Q6IQ22 244 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 FNDC8Q8TC99 324 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 FBXL20Q96IG2 436 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 SLC35A5Q9BS91 424 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 LYARQ9NX58 379 aaKnown RBP12.75□□□□□ -0.37
RNF43-208ENST00000584437 MKS1Q9NXB0 559 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 WTIPA6NIX2 430 aaPredicted RBP12.75□□□□□ -0.37
RNF43-208ENST00000584437 ZSCAN5BA6NJL1 495 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 EFNA1P20827 205 aaPredicted RBP12.75□□□□□ -0.37
RNF43-208ENST00000584437 HSD17B2P37059 387 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 LILRA4P59901 499 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 FAM76BQ5HYJ3 339 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 SH3PXD2AQ5TCZ1 1133 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 NCBP2-AS2Q69YL0 99 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 LINGO4Q6UY18 593 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 C2orf73Q8N5S3 287 aaPredicted RBP12.75□□□□□ -0.37
RNF43-208ENST00000584437 ZNF676Q8N7Q3 588 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 TTLQ8NG68 377 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 PTPRJQ12913 1337 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 VNN1O95497 513 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 RYKP34925 604 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 ARSFP54793 590 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 CMPK2Q5EBM0 449 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 PRPF38BQ5VTL8 546 aaKnown RBP12.75□□□□□ -0.37
RNF43-208ENST00000584437 GPR142Q7Z601 462 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 NR4A3Q92570 626 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 TMEM80Q96HE8 168 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 SLC45A3Q96JT2 553 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 NDC1Q9BTX1 674 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 XKR8Q9H6D3 395 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 BRD7Q9NPI1 651 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 SIRPGQ9P1W8 387 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 CDH7Q9ULB5 785 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 IRF6O14896 467 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 KAT7O95251 611 aa12.75□□□□□ -0.37
RNF43-208ENST00000584437 IFNA21P01568 189 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms