RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 ATP2A1O14983 1001 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 MID1O15344 667 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 PLRG1O43660 514 aaKnown RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 SYNCRIPO60506 623 aaKnown RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 SLC22A3O75751 556 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 GAGE7O76087 117 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 FTCDO95954 541 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 ABCB1P08183 1280 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 LINC00271P0C7V0 271 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 ZNF286BP0CG31 522 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 GAGE12FP0CL80 117 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 GAGE12GP0CL81 117 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 GAGE12IP0CL82 117 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 PTAFRP25105 342 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 DNAJB1P25685 340 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 STX2P32856 288 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 CTNNB1P35222 781 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 RFC2P35250 354 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 KRT2P35908 639 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 LMAN1P49257 510 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 PEX5P50542 639 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 STAT2P52630 851 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 MFAP4P55083 255 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 DLX5P56178 289 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 TFAP4Q01664 338 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 NIPAL4Q0D2K0 466 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 ZNF155Q12901 538 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 CSTF3Q12996 717 aaKnown RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 GAGE1Q13065 139 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 GAGE4Q13068 117 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 NEDD9Q14511 834 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 CALCRLQ16602 461 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 GSTA3Q16772 222 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 DPCR1Q3MIW9 517 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 ZNF718Q3SXZ3 478 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 ODF2Q5BJF6 829 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 HERC4Q5GLZ8 1057 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 PPP6R3Q5H9R7 873 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 JADE1Q6IE81 842 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 WDR73Q6P4I2 378 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 C11orf88Q6PI97 169 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 CATSPER4Q7RTX7 472 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 NUP54Q7Z3B4 507 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 SDCCAG8Q86SQ7 713 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 SATL1Q86VE3 508 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 TICAM1Q8IUC6 712 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 ERC1Q8IUD2 1116 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 ZNF444Q8N0Y2 327 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 ZNF619Q8N2I2 560 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 TMCO5AQ8N6Q1 288 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 ZNF441Q8N8Z8 693 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 SPC24Q8NBT2 197 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 BEST2Q8NFU1 509 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 HUS1BQ8NHY5 278 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 GSDMBQ8TAX9 411 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 WFIKKN2Q8TEU8 576 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 PSPC1Q8WXF1 523 aaKnown RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 MRPS27Q92552 414 aaKnown RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 GTF3C6Q969F1 213 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 TMCO6Q96DC7 493 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 MTBPQ96DY7 904 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 BICD1Q96G01 975 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 CABS1Q96KC9 395 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 IL17FQ96PD4 163 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 PAFAH2Q99487 392 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 CITED2Q99967 270 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 NAA11Q9BSU3 229 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 MMTAG2Q9BU76 263 aaKnown RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 ACAT2Q9BWD1 397 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 UPF3BQ9BZI7 483 aaKnown RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 DNAI2Q9GZS0 605 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 ABCG4Q9H172 646 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 COPS7BQ9H9Q2 264 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 BPIFA1Q9NP55 256 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 CNGB3Q9NQW8 809 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 PAG1Q9NWQ8 432 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 SMARCAL1Q9NZC9 954 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 C1RLQ9NZP8 487 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 NYAP2Q9P242 653 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 KCNG2Q9UJ96 466 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 CCPG1Q9ULG6 757 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 ODF2LQ9ULJ1 636 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 KCNS2Q9ULS6 477 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 BARX2Q9UMQ3 279 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 POMT1Q9Y6A1 747 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 BRWD1Q9NSI6 2320 aa3.26□□□□□ -1.89
HMGB1P6-201ENST00000569046 CFAP54Q96N23 3096 aa3.25□□□□□ -1.89
HMGB1P6-201ENST00000569046 NCOR1O75376 2440 aa3.25□□□□□ -1.89
HMGB1P6-201ENST00000569046 IGKV6D-41A0A0C4DH26 115 aa3.25□□□□□ -1.89
HMGB1P6-201ENST00000569046 TRBC2A0A5B9 178 aa3.25□□□□□ -1.89
HMGB1P6-201ENST00000569046 PRR23AA6NEV1 266 aa3.25□□□□□ -1.89
HMGB1P6-201ENST00000569046 TMEM202A6NGA9 273 aa3.25□□□□□ -1.89
HMGB1P6-201ENST00000569046 EIF3CLB5ME19 914 aaKnown RBP3.25□□□□□ -1.89
HMGB1P6-201ENST00000569046 PAPSS1O43252 624 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P6-201ENST00000569046 SEC14L5O43304 696 aa3.25□□□□□ -1.89
HMGB1P6-201ENST00000569046 B3GALNT1O75752 331 aa3.25□□□□□ -1.89
HMGB1P6-201ENST00000569046 ZNF432O94892 652 aa3.25□□□□□ -1.89
HMGB1P6-201ENST00000569046 CCDC175P0C221 793 aa3.25□□□□□ -1.89
HMGB1P6-201ENST00000569046 KIF5BP33176 963 aa3.25□□□□□ -1.89
HMGB1P6-201ENST00000569046 LIG4P49917 911 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms