RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 C2orf68Q2NKX9 166 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 C10orf25Q5T742 122 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 PPP1R2P3Q6NXS1 205 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 TSSK4Q6SA08 328 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 SERPINA11Q86U17 422 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 TEX9Q8N6V9 391 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 NRACQ8N912 160 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 DNAJB3Q8WWF6 145 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 MAGOHBQ96A72 148 aaKnown RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 ELMOD3Q96FG2 381 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 SERPINB12Q96P63 405 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 CASD1Q96PB1 797 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 RAB3IPQ96QF0 476 aaPredicted RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 TRIM7Q9C029 511 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 TUFT1Q9NNX1 390 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 ZDHHC18Q9NUE0 388 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 MPP6Q9NZW5 540 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 TBC1D14Q9P2M4 693 aa4.15□□□□□ -1.75
LINC00561-201ENST00000565815 LSM4Q9Y4Z0 139 aaKnown RBP4.15□□□□□ -1.75
LINC00561-201ENST00000565815 BRWD1Q9NSI6 2320 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 SLC37A4O43826 429 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 TBCAO75347 108 aaKnown RBP4.14□□□□□ -1.75
LINC00561-201ENST00000565815 TIPRLO75663 272 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 NR3C1P04150 777 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 CTNNA2P26232 953 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 HOXA9P31269 272 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 ABCG1P45844 678 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 SLC18A1P54219 525 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 SNAP25P60880 206 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 ELF3P78545 371 aaPredicted RBP4.14□□□□□ -1.75
LINC00561-201ENST00000565815 RBMS2Q15434 407 aaKnown RBP4.14□□□□□ -1.75
LINC00561-201ENST00000565815 QRICH1Q2TAL8 776 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 SEL1L2Q5TEA6 688 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 TMEM198Q66K66 360 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 ATG9BQ674R7 924 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 NEK10Q6ZWH5 1172 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 TRPM8Q7Z2W7 1104 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 ETNPPLQ8TBG4 499 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 ZCCHC10Q8TBK6 192 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 GRK7Q8WTQ7 553 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 TCP11Q8WWU5 503 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 MYADMQ96S97 322 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 PSMB7Q99436 277 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 SYT11Q9BT88 431 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 B3GNT4Q9C0J1 378 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 TRPV5Q9NQA5 729 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 INTS9Q9NV88 658 aaKnown RBP4.14□□□□□ -1.75
LINC00561-201ENST00000565815 EHD2Q9NZN4 543 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 SLCO3A1Q9UIG8 710 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 CNTNAP2Q9UHC6 1331 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 ANKRD65E5RJM6 399 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 F8W810 466 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 H0Y626 953 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 TRIM16O95361 564 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 TDP2O95551 362 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 ATP6V1G2O95670 118 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 OAS1P00973 400 aaKnown RBP4.14□□□□□ -1.75
LINC00561-201ENST00000565815 HLA-DQA2P01906 255 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 CYC1P08574 325 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 G6PDP11413 515 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 GZMAP12544 262 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 CSRP1P21291 193 aaKnown RBP4.14□□□□□ -1.75
LINC00561-201ENST00000565815 NFKBIAP25963 317 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 TMOD1P28289 359 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 SLC10A2Q12908 348 aaPredicted RBP4.14□□□□□ -1.75
LINC00561-201ENST00000565815 IRF3Q14653 427 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 TAF11Q15544 211 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 SOWAHAQ2M3V2 549 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 USH1GQ495M9 461 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 MMEL1Q495T6 779 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 N4BP2L1Q5TBK1 243 aaPredicted RBP4.14□□□□□ -1.75
LINC00561-201ENST00000565815 PPP1R21Q6ZMI0 780 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 ZNF852Q6ZMS4 543 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 C12orf56Q8IXR9 622 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 GPATCH11Q8N954 259 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 ARRDC2Q8TBH0 407 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 URGCPQ8TCY9 931 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 SLC35C1Q96A29 364 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 MXRA8Q9BRK3 442 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 DDX47Q9H0S4 455 aaKnown RBP4.14□□□□□ -1.75
LINC00561-201ENST00000565815 PSTPIP2Q9H939 334 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 LTB4R2Q9NPC1 389 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 SIX2Q9NPC8 291 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 MRPL17Q9NRX2 175 aaKnown RBP4.14□□□□□ -1.75
LINC00561-201ENST00000565815 CISD1Q9NZ45 108 aaKnown RBP4.14□□□□□ -1.75
LINC00561-201ENST00000565815 SMARCAL1Q9NZC9 954 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 GCNT4Q9P109 453 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 PTGFRNQ9P2B2 879 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 NEUROG3Q9Y4Z2 214 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 CLDN16Q9Y5I7 305 aa4.14□□□□□ -1.75
LINC00561-201ENST00000565815 CACNA1AO00555 2505 aa4.13□□□□□ -1.75
LINC00561-201ENST00000565815 PATJQ8NI35 1801 aa4.13□□□□□ -1.75
LINC00561-201ENST00000565815 A0A0U1RQF3 1178 aa4.13□□□□□ -1.75
LINC00561-201ENST00000565815 ARHGAP10A1A4S6 786 aa4.13□□□□□ -1.75
LINC00561-201ENST00000565815 C1orf226A1L170 272 aa4.13□□□□□ -1.75
LINC00561-201ENST00000565815 ZSCAN5CA6NGD5 496 aaPredicted RBP4.13□□□□□ -1.75
LINC00561-201ENST00000565815 AGAP14A8MT82 685 aa4.13□□□□□ -1.75
LINC00561-201ENST00000565815 RASGRF2O14827 1237 aa4.13□□□□□ -1.75
LINC00561-201ENST00000565815 TTI1O43156 1089 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms