RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 TVP23AA6NH52 213 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 AGRPO00253 132 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 PTTG1O95997 202 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 SPAM1P38567 509 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 PTGER3P43115 390 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 HERVK_113P63132 956 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 CLCQ05315 142 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 NTRK3Q16288 839 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 RPL13AP3Q6NVV1 102 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 SMARCD3Q6STE5 483 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 FAM183BPQ6ZVS7 135 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 C12orf40Q86WS4 652 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 AVL9Q8NBF6 648 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 FEM1CQ96JP0 617 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 TMEM209Q96SK2 561 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 ERVK-6Q9BXR3 956 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 PORCNQ9H237 461 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 GPSM3Q9Y4H4 160 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 MDFIC2A0A1B0GVS7 189 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 hCG_2039718K7EN88 272 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 RCBTB2O95199 551 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 ATE1O95260 518 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 PAHP00439 452 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 CAP2P40123 477 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 LUMP51884 338 aaPredicted RBP4.98□□□□□ -1.61
SMG1-211ENST00000565324 ACTBP60709 375 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 ACTG1P63261 375 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 PUS10Q3MIT2 529 aaKnown RBP4.98□□□□□ -1.61
SMG1-211ENST00000565324 TMED4Q7Z7H5 227 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 SKA3Q8IX90 412 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 CHPT1Q8WUD6 406 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 OR8D1Q8WZ84 308 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 MTFR1LQ9H019 292 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 SH2B3Q9UQQ2 575 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 FAM230AA0A1W2PPH8 454 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 ZNF726A6NNF4 738 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 HHLA1C9JL84 531 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 C2P06681 752 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 FMO3P31513 532 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 BMP8BP34820 402 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 POLR2HP52434 150 aaKnown RBP4.98□□□□□ -1.61
SMG1-211ENST00000565324 RHDQ02161 417 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 HSPB3Q12988 150 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 NAE1Q13564 534 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 DNASE1L3Q13609 305 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 ZNF169Q14929 603 aaPredicted RBP4.98□□□□□ -1.61
SMG1-211ENST00000565324 ZC3H12AQ5D1E8 599 aaKnown RBP4.98□□□□□ -1.61
SMG1-211ENST00000565324 ZNF529Q6P280 563 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 FAM198BQ6UWH4 519 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 RD3Q7Z3Z2 195 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 BMP8AQ7Z5Y6 402 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 DENND1AQ8TEH3 1009 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 EXOSC8Q96B26 276 aaKnown RBP4.98□□□□□ -1.61
SMG1-211ENST00000565324 TMEM80Q96HE8 168 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 OR14A2Q96R54 314 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 ADAMTS10Q9H324 1103 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 ZNF334Q9HCZ1 680 aaPredicted RBP4.98□□□□□ -1.61
SMG1-211ENST00000565324 GPATCH2Q9NW75 528 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 A0A0J9YVX5 310 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 CD6P30203 668 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 OTOP1Q7RTM1 612 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 TMCO2Q7Z6W1 182 aaPredicted RBP4.98□□□□□ -1.61
SMG1-211ENST00000565324 YIPF7Q8N8F6 280 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 FAM46DQ8NEK8 389 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 BBS1Q8NFJ9 593 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 FNDC8Q8TC99 324 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 TMEM45AQ9NWC5 275 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 RNF6Q9Y252 685 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 EVPLQ92817 2033 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 E2F3O00716 465 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 LRRTM2O43300 516 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 GOT1P17174 413 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 HOXB9P17482 250 aaPredicted RBP4.98□□□□□ -1.61
SMG1-211ENST00000565324 RARRES1P49788 294 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 PGM5Q15124 567 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 ZNF792Q3KQV3 632 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 LRIF1Q5T3J3 769 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 FAM199XQ6PEV8 388 aaPredicted RBP4.98□□□□□ -1.61
SMG1-211ENST00000565324 SNX29P2Q8IUI4 249 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 ZNF584Q8IVC4 421 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 ATAD1Q8NBU5 361 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 TLCD1Q96CP7 247 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 LGMNQ99538 433 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 UCK2Q9BZX2 261 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 TMEM39BQ9GZU3 492 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 QPCTLQ9NXS2 382 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 RIMBP3CA6NJZ7 1639 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 RIMBP3BA6NNM3 1639 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 RIMBP3Q9UFD9 1639 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 C17orf113A0A1B0GUU1 675 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 ELOA3DA6NLF2 546 aaPredicted RBP4.98□□□□□ -1.61
SMG1-211ENST00000565324 NDST3O95803 873 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 PAK4O96013 591 aaPredicted RBP4.98□□□□□ -1.61
SMG1-211ENST00000565324 DPP6P42658 865 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 SOX9P48436 509 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.98□□□□□ -1.617e-7■■■□□ 16.1
SMG1-211ENST00000565324 ELOA3BQ3SY89 546 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 FOXRED2Q8IWF2 684 aa4.98□□□□□ -1.61
SMG1-211ENST00000565324 MRPL41Q8IXM3 137 aaKnown RBP4.98□□□□□ -1.61
SMG1-211ENST00000565324 LRRN4CLQ8ND94 238 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms