RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SERGEFQ9UGK8 458 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 SERTM1A2A2V5 107 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 IGLON5A6NGN9 336 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 AKAP10O43572 662 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 TPST1O60507 370 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 UGDHO60701 494 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 LRATO95237 230 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 PCCBP05166 539 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 CLDN8P56748 225 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 GTF2H3Q13889 308 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 INPP5AQ14642 412 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 FXNQ16595 210 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 C2orf27AQ580R0 203 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 AGBL4Q5VU57 503 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 DOK6Q6PKX4 331 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 PRR23BQ6ZRT6 265 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 ERMP1Q7Z2K6 904 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 TRMT11Q7Z4G4 463 aaKnown RBP18.53■□□□□ 0.56
SMPD3-203ENST00000563226 C11orf96Q7Z7L8 435 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 OR52E6Q96RD3 313 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 EFHD1Q9BUP0 239 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 SH2B3Q9UQQ2 575 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.53■□□□□ 0.56
SMPD3-203ENST00000563226 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.53■□□□□ 0.56
SMPD3-203ENST00000563226 NPIPB8E9PQR5 432 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 SF1Q15637 639 aaKnown RBP18.53■□□□□ 0.56
SMPD3-203ENST00000563226 NRF1Q16656 503 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 CYP51A1Q16850 503 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 HEATR4Q86WZ0 1026 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 CHPFQ8IZ52 775 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 SPDYE1Q8NFV5 336 aaPredicted RBP18.53■□□□□ 0.56
SMPD3-203ENST00000563226 GFM2Q969S9 779 aaKnown RBP18.53■□□□□ 0.56
SMPD3-203ENST00000563226 HIC2Q96JB3 615 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 LINC00615Q96LM1 132 aaPredicted RBP18.53■□□□□ 0.56
SMPD3-203ENST00000563226 SLC29A1Q99808 456 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 CIB1Q99828 191 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 MUC13Q9H3R2 512 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 PCDHGB4Q9UN71 923 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 PCDHGB5Q9Y5G0 923 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 AP4B1Q9Y6B7 739 aa18.53■□□□□ 0.56
SMPD3-203ENST00000563226 TICRRQ7Z2Z1 1910 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 FAM149AA5PLN7 773 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 APODP05090 189 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 PRPS2P11908 318 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 PSMA4P25789 261 aaKnown RBP18.52■□□□□ 0.56
SMPD3-203ENST00000563226 EIF2DP41214 584 aaKnown RBP18.52■□□□□ 0.56
SMPD3-203ENST00000563226 TBPL1P62380 186 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 DLX2Q07687 328 aaPredicted RBP18.52■□□□□ 0.56
SMPD3-203ENST00000563226 PDK3Q15120 406 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 C6orf52Q5T4I8 152 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 GRHL2Q6ISB3 625 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 NOXRED1Q6NXP6 359 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.52■□□□□ 0.56
SMPD3-203ENST00000563226 HOMEZQ8IX15 550 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 OR8J3Q8NGG0 315 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 NEIL2Q969S2 332 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 RAB7BQ96AH8 199 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 ELSPBP1Q96BH3 223 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 COX14Q96I36 57 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 LGR4Q9BXB1 951 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 SCOCQ9UIL1 159 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 V9GYQ6 96 aa18.52■□□□□ 0.56
SMPD3-203ENST00000563226 EYSQ5T1H1 3165 aa18.52■□□□□ 0.55
SMPD3-203ENST00000563226 PCM1Q15154 2024 aa18.52■□□□□ 0.55
SMPD3-203ENST00000563226 C7orf72A4D263 438 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 SH3BGRLO75368 114 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 ETHE1O95571 254 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 LAMP2P13473 410 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 CKMT2P17540 419 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 SEC13P55735 322 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 CST6Q15828 149 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 ITPRIPL2Q3MIP1 535 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 FAM46CQ5VWP2 391 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 SYTL1Q8IYJ3 562 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 DTWD1Q8N5C7 304 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 OR2L2Q8NH16 312 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 EZH1Q92800 747 aaPredicted RBP18.51■□□□□ 0.55
SMPD3-203ENST00000563226 MAGEB10Q96LZ2 347 aaPredicted RBP18.51■□□□□ 0.55
SMPD3-203ENST00000563226 ZNF583Q96ND8 569 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 SERHLQ9NQF3 203 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 CLEC1BQ9P126 229 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.51■□□□□ 0.55
SMPD3-203ENST00000563226 PCDHB3Q9Y5E6 796 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 VEGFDO43915 354 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 MAPK9P45984 424 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 CSTF3Q12996 717 aaKnown RBP18.51■□□□□ 0.55
SMPD3-203ENST00000563226 TSTA3Q13630 321 aaPredicted RBP18.51■□□□□ 0.55
SMPD3-203ENST00000563226 ENPP2Q13822 863 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 GK3PQ14409 553 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 WSCD2Q2TBF2 565 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 ATAT1Q5SQI0 421 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 OR52E8Q6IFG1 317 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 PNCKQ6P2M8 343 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 ANKRD46Q86W74 232 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 RIMKLAQ8IXN7 391 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 GOLM1Q8NBJ4 401 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 FBXO15Q8NCQ5 510 aaPredicted RBP18.51■□□□□ 0.55
SMPD3-203ENST00000563226 FCRL1Q96LA6 429 aa18.51■□□□□ 0.55
SMPD3-203ENST00000563226 PAIP1Q9H074 479 aaKnown RBP18.51■□□□□ 0.55
SMPD3-203ENST00000563226 RSPH9Q9H1X1 276 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms