RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 CCDC177Q9NQR7 707 aaPredicted RBP16.83■□□□□ 0.28
TPM1-214ENST00000558544 AKAP7Q9P0M2 348 aaPredicted RBP16.83■□□□□ 0.28
TPM1-214ENST00000558544 SEMA5BQ9P283 1151 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 TAC3Q9UHF0 121 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 LGALS13Q9UHV8 139 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 NEUROG3Q9Y4Z2 214 aa16.83■□□□□ 0.28
TPM1-214ENST00000558544 MDC1Q14676 2089 aaKnown RBP16.83■□□□□ 0.28
TPM1-214ENST00000558544 SUPT3HB4E1H0 165 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 SUPT3HO75486 399 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 ZBTB11O95625 1053 aaPredicted RBP16.82■□□□□ 0.28
TPM1-214ENST00000558544 COL6A2P12110 1019 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 CAMK2BQ13554 666 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 ZXDCQ2QGD7 858 aaPredicted RBP16.82■□□□□ 0.28
TPM1-214ENST00000558544 TSNAXIP1Q2TAA8 658 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 TECRLQ5HYJ1 363 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 THEMIS2Q5TEJ8 643 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 FAM129CQ86XR2 697 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 IQCKQ8N0W5 287 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 CARFQ8N187 725 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 FBXO39Q8N4B4 442 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 OR2A1Q8NGT9 310 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 WDR36Q8NI36 951 aaKnown RBP16.82■□□□□ 0.28
TPM1-214ENST00000558544 RHEBL1Q8TAI7 183 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 ACMSDQ8TDX5 336 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 KLHL6Q8WZ60 621 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 PYCR2Q96C36 320 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 SCYL1Q96KG9 808 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 TRAPPC9Q96Q05 1148 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 OCIAD1Q9NX40 245 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 SOHLH2Q9NX45 425 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 NUDT4Q9NZJ9 180 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 CD274Q9NZQ7 290 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 XPR1Q9UBH6 696 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 KLHL20Q9Y2M5 609 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 PCDHB11Q9Y5F2 797 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 NCOR2Q9Y618 2525 aa16.82■□□□□ 0.28
TPM1-214ENST00000558544 EFCAB7A8K855 629 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 UBXN8O00124 270 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 S100BP04271 92 aaPredicted RBP16.81■□□□□ 0.28
TPM1-214ENST00000558544 NELFEP18615 380 aaKnown RBP16.81■□□□□ 0.28
TPM1-214ENST00000558544 ITIH1P19827 911 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 MAGP20916 626 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 ARL4DP49703 201 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 YBX1P67809 324 aaKnown RBP16.81■□□□□ 0.28
TPM1-214ENST00000558544 GABREP78334 506 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 EIF3IQ13347 325 aaKnown RBP16.81■□□□□ 0.28
TPM1-214ENST00000558544 KCNAB1Q14722 419 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 C18orf21Q32NC0 220 aaPredicted RBP16.81■□□□□ 0.28
TPM1-214ENST00000558544 CEP85LQ5SZL2 805 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 PRAMEF13Q5VWM6 474 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 KIAA1614Q5VZ46 1190 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 PDPRQ8NCN5 879 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 OR2L3Q8NG85 312 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 OR56A3Q8NH54 315 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 RHBDF1Q96CC6 855 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 ARGLU1Q9NWB6 273 aaPredicted RBP16.81■□□□□ 0.28
TPM1-214ENST00000558544 WWOXQ9NZC7 414 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 MSRB2Q9Y3D2 182 aa16.81■□□□□ 0.28
TPM1-214ENST00000558544 PLD2O14939 933 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 PRAMEF10O60809 474 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 JMJD7P0C870 316 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 EBLN1P0CF75 366 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 CCL4P13236 92 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 CMPK1P30085 196 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 ETV5P41161 510 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 HNMTP50135 292 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 SH3BP2P78314 561 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 FBXO48Q5FWF7 155 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 ICE2Q659A1 982 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 CAPN13Q6MZZ7 669 aaPredicted RBP16.8■□□□□ 0.28
TPM1-214ENST00000558544 KMT5CQ86Y97 462 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 C4orf33Q8N1A6 199 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 C19orf47Q8N9M1 422 aaKnown RBP16.8■□□□□ 0.28
TPM1-214ENST00000558544 SLC41A2Q96JW4 573 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 TMEM79Q9BSE2 394 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 SGPP1Q9BX95 441 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 MRPS30Q9NP92 439 aaKnown RBP16.8■□□□□ 0.28
TPM1-214ENST00000558544 SIDT1Q9NXL6 827 aaKnown RBP16.8■□□□□ 0.28
TPM1-214ENST00000558544 PISDQ9UG56 409 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 ANGPTL2Q9UKU9 493 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 BTRCQ9Y297 605 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 CEP295Q9C0D2 2601 aa16.8■□□□□ 0.28
TPM1-214ENST00000558544 CCDC189A1A4V9 331 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 SYCE1LA8MT33 242 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 TK2O00142 265 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 TAPBPO15533 448 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 FKBP9O95302 570 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 RBP1P09455 135 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 FGF3P11487 239 aaPredicted RBP16.79■□□□□ 0.28
TPM1-214ENST00000558544 CCND1P24385 295 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 MLLT3P42568 568 aaPredicted RBP16.79■□□□□ 0.28
TPM1-214ENST00000558544 MAPK10P53779 464 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 HSD11B2P80365 405 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 CASP8Q14790 479 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 ZIC1Q15915 447 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 PTCHD3Q3KNS1 767 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 SULT1C3Q6IMI6 304 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 LRIG3Q6UXM1 1119 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 SH2D5Q6ZV89 423 aa16.79■□□□□ 0.28
TPM1-214ENST00000558544 TRABD2AQ86V40 505 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms