RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 RFX2P48378 723 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 ITGA1P56199 1179 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 GTDC1Q4AE62 458 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 PIK3R6Q5UE93 754 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 C19orf48Q6RUI8 117 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 UTS2BQ765I0 119 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 ADAMTSL2Q86TH1 951 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 RNF130Q86XS8 419 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 DCBLD1Q8N8Z6 715 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 NUDT8Q8WV74 236 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 GGHQ92820 318 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 EMID1Q96A84 441 aaPredicted RBP7.58□□□□□ -1.2
CHD8-209ENST00000555935 ESAMQ96AP7 390 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 LINGO1Q96FE5 620 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 HMCESQ96FZ2 354 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 KLHL5Q96PQ7 755 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 CHCHD6Q9BRQ6 235 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 CENPOQ9BU64 300 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 SLC22A4Q9H015 551 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 SMURF1Q9HCE7 757 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 ABCC13Q9NSE7 274 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 NLE1Q9NVX2 485 aaPredicted RBP7.58□□□□□ -1.2
CHD8-209ENST00000555935 ERVK13-1Q9NX77 482 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 MPP6Q9NZW5 540 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 PCDHB5Q9Y5E4 795 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 PCDHGA6Q9Y5G7 932 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 A0A0U1RQS6 177 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 OR7A17O14581 309 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 ARHGEF9O43307 516 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 KIAA0513O60268 411 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 WDR47O94967 919 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 DNTTP04053 509 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 RHOQP17081 205 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 TNFSF8P32971 234 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 SLC19A1P41440 591 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 GNPDA1P46926 289 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 OR3A3P47888 321 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 MLLT6P55198 1093 aaPredicted RBP7.58□□□□□ -1.2
CHD8-209ENST00000555935 CSTF3Q12996 717 aaKnown RBP7.58□□□□□ -1.2
CHD8-209ENST00000555935 TARDBPQ13148 414 aaKnown RBP eCLIP7.58□□□□□ -1.2
CHD8-209ENST00000555935 GTF2H2Q13888 395 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 IRF3Q14653 427 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 PTPRCAPQ14761 206 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 PTPRNQ16849 979 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 FAM171A1Q5VUB5 890 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 TIGD3Q6B0B8 471 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 GTF2H2CQ6P1K8 395 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 SERPINA11Q86U17 422 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 PLCZ1Q86YW0 608 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 APOBEC3FQ8IUX4 373 aaKnown RBP7.58□□□□□ -1.2
CHD8-209ENST00000555935 TCTE3Q8IZS6 198 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 FAM9CQ8IZT9 166 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 SIX5Q8N196 739 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 CYP4Z2PQ8N1L4 340 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 CADM2Q8N3J6 435 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 LIX1Q8N485 282 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 ZFAND1Q8TCF1 268 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 UBE2FQ969M7 185 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 NEDD4LQ96PU5 975 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 HBEGFQ99075 208 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 TRAF4Q9BUZ4 470 aaPredicted RBP7.58□□□□□ -1.2
CHD8-209ENST00000555935 POLR1EQ9GZS1 481 aaKnown RBP7.58□□□□□ -1.2
CHD8-209ENST00000555935 RNF39Q9H2S5 420 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 QTRT2Q9H974 415 aaKnown RBP7.58□□□□□ -1.2
CHD8-209ENST00000555935 TRIM39Q9HCM9 518 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 THUMPD1Q9NXG2 353 aaKnown RBP7.58□□□□□ -1.2
CHD8-209ENST00000555935 PIN4Q9Y237 131 aaKnown RBP7.58□□□□□ -1.2
CHD8-209ENST00000555935 GPSM3Q9Y4H4 160 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 HS3ST4Q9Y661 456 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 COMMD10Q9Y6G5 202 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 PDCD11Q14690 1871 aaKnown RBP7.58□□□□□ -1.2
CHD8-209ENST00000555935 ANKRD36A6QL64 1941 aa7.58□□□□□ -1.2
CHD8-209ENST00000555935 NYNRINQ9P2P1 1898 aaKnown RBP7.57□□□□□ -1.2
CHD8-209ENST00000555935 RRN3P2A6NIE6 340 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 A8MV72 311 aaPredicted RBP7.57□□□□□ -1.2
CHD8-209ENST00000555935 B8ZZF3 427 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 CTDSP2O14595 271 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 STX7O15400 261 aaKnown RBP7.57□□□□□ -1.2
CHD8-209ENST00000555935 TRIM3O75382 744 aaPredicted RBP7.57□□□□□ -1.2
CHD8-209ENST00000555935 CNMDO75829 334 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 CNPP09543 421 aaKnown RBP7.57□□□□□ -1.2
CHD8-209ENST00000555935 HOXB9P17482 250 aaPredicted RBP7.57□□□□□ -1.2
CHD8-209ENST00000555935 PBX3P40426 434 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 HTR2BP41595 481 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 ZNF140P52738 457 aaPredicted RBP7.57□□□□□ -1.2
CHD8-209ENST00000555935 GPLD1P80108 840 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 SCN1BQ07699 218 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 ASAH1Q13510 395 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 C10orf62Q5T681 223 aaPredicted RBP7.57□□□□□ -1.2
CHD8-209ENST00000555935 ERICH5Q6P6B1 374 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 ZNF767PQ75MW2 155 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 SAMD7Q7Z3H4 446 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 MILR1Q7Z6M3 343 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 C14orf80Q86SX3 495 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 MICALL2Q8IY33 904 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 DEPDC4Q8N2C3 294 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 STX19Q8N4C7 294 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 CD200R1Q8TD46 325 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 CHTF18Q8WVB6 975 aa7.57□□□□□ -1.2
CHD8-209ENST00000555935 MYLPFQ96A32 169 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms