RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 ZNF148Q9UQR1 794 aa11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 COPG1Q9Y678 874 aaKnown RBP11.7□□□□□ -0.54
MTHFD1-207ENST00000554677 LOC105369274A0A096LPK9 316 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 LOC102723532A0A0G2JNH3 316 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 ANKUB1A6NFN9 424 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 F8W8V4 182 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 KLHL41O60662 606 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 GAS8O95995 478 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 RPN2P04844 631 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 APRTP07741 180 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 RPS3P23396 243 aaKnown RBP eCLIP11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 ITGA3P26006 1051 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 ARNTP27540 789 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 PSMB5P28074 263 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 NMBRP28336 390 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 PPARGP37231 505 aaPredicted RBP11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 GLRBP48167 497 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 CRADDP78560 199 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 GBX1Q14549 363 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 GRM7Q14831 915 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 ZC3H12BQ5HYM0 836 aaKnown RBP11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 TCTE1Q5JU00 501 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 WASHC2DQ5SRD0 308 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 ZNF787Q6DD87 383 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 FRMPD2BQ6IN97 320 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 FBXO42Q6P3S6 717 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 SHISA6Q6ZSJ9 500 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 MAMDC2Q7Z304 686 aaPredicted RBP11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 KCNMB4Q86W47 210 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 OR4N4Q8N0Y3 316 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 OR2A1Q8NGT9 310 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 HMGCLL1Q8TB92 370 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 BIRC8Q96P09 236 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 ILKAPQ9H0C8 392 aaPredicted RBP11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 SOX17Q9H6I2 414 aaPredicted RBP11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 INTS7Q9NVH2 962 aaKnown RBP11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 STOX2Q9P2F5 926 aaPredicted RBP11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 CDC23Q9UJX2 597 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 SLC39A10Q9ULF5 831 aa11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 RUVBL2Q9Y230 463 aaKnown RBP11.69□□□□□ -0.54
MTHFD1-207ENST00000554677 CPAMD8Q8IZJ3 1885 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 GTF3C1Q12789 2109 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 E7EVH7 732 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 SRPX2O60687 465 aaPredicted RBP11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 FKBP9O95302 570 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 PIM1P11309 404 aaPredicted RBP11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 BDKRB1P46663 353 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 TTPAP49638 278 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 SESN2P58004 480 aaPredicted RBP11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 VSX2P58304 361 aaPredicted RBP11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 FASTKQ14296 549 aaKnown RBP11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 KCTD19Q17RG1 926 aaPredicted RBP11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 CTSL3PQ5NE16 218 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 PTRHD1Q6GMV3 140 aaKnown RBP11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 METTL27Q8N6F8 245 aaPredicted RBP11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 OR2L3Q8NG85 312 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 OR11G2Q8NGC1 345 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 PPP4R1Q8TF05 950 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 UBE2Q2Q8WVN8 375 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 TM9SF4Q92544 642 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 RAD51AP1Q96B01 352 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 MIPEPQ99797 713 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 WDR77Q9BQA1 342 aaPredicted RBP11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 SELENOSQ9BQE4 189 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 TSSK1BQ9BXA7 367 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 SYNPO2LQ9H987 977 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 PAK5Q9P286 719 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 TTC7AQ9ULT0 858 aaPredicted RBP11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 NOVA2Q9UNW9 492 aaKnown RBP11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 SLC5A6Q9Y289 635 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 DRG1Q9Y295 367 aaKnown RBP11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 MAU2Q9Y6X3 613 aa11.68□□□□□ -0.54
MTHFD1-207ENST00000554677 PKDREJQ9NTG1 2253 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 HYKKA2RU49 373 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 OR2A25A4D2G3 310 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 E2F3O00716 465 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 KLHL18O94889 574 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 MATN4O95460 622 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 DCTP40126 519 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 CCNG2Q16589 344 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 PRTGQ2VWP7 1150 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 FAM214AQ32MH5 1076 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 AARS2Q5JTZ9 985 aaKnown RBP11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 SEL1L2Q5TEA6 688 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 MEI1Q5TIA1 1274 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 AGAP7PQ5VUJ5 663 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 ATG9BQ674R7 924 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 DRICH1Q6PGQ1 229 aaPredicted RBP11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 CES3Q6UWW8 571 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 LAPTM4BQ86VI4 370 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 ST6GALNAC3Q8NDV1 305 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 PPHLN1Q8NEY8 458 aaKnown RBP11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 DNAJB14Q8TBM8 379 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 MFSD3Q96ES6 412 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 AGAP4Q96P64 663 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 PANX3Q96QZ0 392 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 KIFC1Q9BW19 673 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 LHPPQ9H008 270 aa11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 MRM3Q9HC36 420 aaKnown RBP11.67□□□□□ -0.54
MTHFD1-207ENST00000554677 EIF2B3Q9NR50 452 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms