RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 IGDCC3Q8IVU1 814 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 PHTF2Q8N3S3 785 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 KLHL36Q8N4N3 616 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 PIWIL1Q96J94 861 aaKnown RBP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 ZNF382Q96SR6 550 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 MIR1-1HGQ9H1L0 117 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 MED28Q9H204 178 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 H0YJX3 145 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 RASGRP1O95267 797 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 CLDN10P78369 228 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 SCAPQ12770 1279 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 TARDBPQ13148 414 aaKnown RBP eCLIP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 HACD2Q6Y1H2 254 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 ZBTB46Q86UZ6 589 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 SP140LQ9H930 580 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 NEUROD4Q9HD90 331 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 CCDC59Q9P031 241 aaKnown RBP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 SLC16A5O15375 505 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 CSNK2A2P19784 350 aaPredicted RBP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 AVPR1BP47901 424 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 XKP51811 444 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 NCBP2P52298 156 aaKnown RBP eCLIP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 HSF2Q03933 536 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 RING1Q06587 406 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 FAM91A1Q658Y4 838 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 LGI4Q8N135 537 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 CADM2Q8N3J6 435 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 COX18Q8N8Q8 333 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 OR8J3Q8NGG0 315 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 TSEN15Q8WW01 171 aaKnown RBP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 TP53INP1Q96A56 240 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 LMLNQ96KR4 655 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 RPL10LQ96L21 214 aaKnown RBP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 C12orf66Q96MD2 445 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 RIPOR3Q96MK2 946 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 CDK15Q96Q40 435 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 PCYT2Q99447 389 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 MTERF1Q99551 399 aaKnown RBP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 ADAM7Q9H2U9 754 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 CRTAC1Q9NQ79 661 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 TFECO14948 347 aaPredicted RBP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 RSL1D1O76021 490 aaKnown RBP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 C1QTNF8P60827 252 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 THOC6Q86W42 341 aaKnown RBP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 IFNLR1Q8IU57 520 aaPredicted RBP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 CD244Q9BZW8 370 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 TPK1Q9H3S4 243 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 MOCS1Q9NZB8 636 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 TBX18O95935 607 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 CD36P16671 472 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 VITQ6UXI7 678 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 ABHD13Q7L211 337 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 ZNF420Q8TAQ5 688 aaPredicted RBP12.22□□□□□ -0.45
COL4A6-209ENST00000545689 MGME1Q9BQP7 344 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 RIOK2Q9BVS4 552 aaKnown RBP12.22□□□□□ -0.45
COL4A6-209ENST00000545689 STRA6Q9BX79 667 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 MEAF6Q9HAF1 191 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 TRIM39Q9HCM9 518 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 TMEM233B4DJY2 109 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 H0YAE9 185 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 TLR4O00206 839 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 SOCS5O75159 536 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 DNAJB5O75953 348 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 PRKD3O94806 890 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 HPRP00739 348 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 PLEKHS1Q5SXH7 462 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 GPR153Q6NV75 609 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.22□□□□□ -0.45
COL4A6-209ENST00000545689 ATCAYQ86WG3 371 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 EZH1Q92800 747 aaPredicted RBP12.22□□□□□ -0.45
COL4A6-209ENST00000545689 RBM18Q96H35 190 aaKnown RBP12.22□□□□□ -0.45
COL4A6-209ENST00000545689 OSER1Q9NX31 292 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 EDDM13A0A1B0GTR0 161 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 LOC100130705A0A1B0GUX0 176 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 UPK3BL1B0FP48 263 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 UPK3BL2E5RIL1 263 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 CDC7O00311 574 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 ENPP3O14638 875 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 SEPHS1P49903 392 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 GJA9P57773 515 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 GRPEL2Q8TAA5 225 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 BIRC7Q96CA5 298 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 PSKH2Q96QS6 385 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 MND1Q9BWT6 205 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 TVP23BQ9NYZ1 205 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 A0A1W2PQ72 361 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 PRMT3O60678 531 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 MATN4O95460 622 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 ACADLP28330 430 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 GRK6P43250 576 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 TUBA3EQ6PEY2 450 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 SLC2A7Q6PXP3 512 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 PIM3Q86V86 326 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 UMODL1-AS1Q8N2C9 162 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 LRCH3Q96II8 777 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 GALPQ9UBC7 116 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 IFNA6P05013 189 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 ALPIP09923 528 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 IL7RP16871 459 aa12.22□□□□□ -0.45
COL4A6-209ENST00000545689 CKMT2P17540 419 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms