RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 TGIF1Q15583 401 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 PRICKLE4Q2TBC4 344 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 SYPL2Q5VXT5 272 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 SP5Q6BEB4 398 aaPredicted RBP6.05□□□□□ -1.44
CPSF7-222ENST00000544585 GRHL2Q6ISB3 625 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 CLEC18BQ6UXF7 455 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 PTAR1Q7Z6K3 402 aaPredicted RBP6.05□□□□□ -1.44
CPSF7-222ENST00000544585 PXKQ7Z7A4 578 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 DTX2Q86UW9 622 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 CLEC18CQ8NCF0 446 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 OR2A12Q8NGT7 310 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 ZNF564Q8TBZ8 553 aaPredicted RBP6.05□□□□□ -1.44
CPSF7-222ENST00000544585 CREB3L4Q8TEY5 395 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 FAM149B1Q96BN6 582 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 EEF2KMTQ96G04 330 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 BOD1Q96IK1 185 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 CD180Q99467 661 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 CMKLR1Q99788 373 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 AP1M1Q9BXS5 423 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 TEX101Q9BY14 249 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 ALOXE3Q9BYJ1 711 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 MIS12Q9H081 205 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 EPB41L5Q9HCM4 733 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 GALNT9Q9HCQ5 603 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 FZD3Q9NPG1 666 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 TMEM51Q9NW97 253 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 MTMR6Q9Y217 621 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 HS3ST2Q9Y278 367 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 CHST2Q9Y4C5 530 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 PSAT1Q9Y617 370 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 CREBBPQ92793 2442 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 DOCK9Q9BZ29 2069 aa6.05□□□□□ -1.44
CPSF7-222ENST00000544585 RP1P56715 2156 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 A0A1W2PRQ8 180 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 SH2D7A6NKC9 451 aaPredicted RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 TMEM110-MUSTN1A8MSY1 372 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 NPIPB6E9PJ23 425 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 CETN3O15182 167 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 SLC16A3O15427 465 aaKnown RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 GPR42O15529 346 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 NUAK1O60285 661 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 GCATO75600 419 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 CTSLP07711 333 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 ALPIP09923 528 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 SRCP12931 536 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 ACP5P13686 325 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 ZNF37AP17032 561 aaPredicted RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 CCR1P32246 355 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 LIPAP38571 399 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 RPL34P49207 117 aaKnown RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 THOP1P52888 689 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 CDH4P55283 916 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 CDH15P55291 814 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 PFN3P60673 137 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 CCL7P80098 99 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 EIF2B5Q13144 721 aaKnown RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 C1orf61Q13536 156 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 EIF4EBP2Q13542 120 aaPredicted RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 DCTN2Q13561 401 aaKnown RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 ELOCQ15369 112 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 EDRF1Q3B7T1 1238 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 C5orf22Q49AR2 442 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 RUNDC3AQ59EK9 446 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 RESP18Q5W5W9 173 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 SEL1L3Q68CR1 1132 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 ATL3Q6DD88 541 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 OR6B2Q6IFH4 312 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 FBXL22Q6P050 247 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 TMEM270Q6UE05 265 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 Q6ZRM9 215 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 ADGRG6Q86SQ4 1221 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 GKN2Q86XP6 184 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 SLC35F3Q8IY50 421 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 GUF1Q8N442 669 aaKnown RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 GPATCH11Q8N954 259 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 DENND6BQ8NEG7 585 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 METTL6Q8TCB7 284 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 RAB7BQ96AH8 199 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 ARHGEF26Q96DR7 871 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 RPRD1AQ96P16 312 aaPredicted RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 CATSPER2Q96P56 530 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 KLF6Q99612 283 aaPredicted RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 PRMT1Q99873 361 aaKnown RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 CLPBQ9H078 707 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 LRRN3Q9H3W5 708 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 THAP9Q9H5L6 903 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 POPDC2Q9HBU9 364 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 SEPT11Q9NVA2 429 aaKnown RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 BEX4Q9NWD9 120 aaPredicted RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 AKAP7Q9P0M2 348 aaPredicted RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 APOBEC3BQ9UH17 382 aaKnown RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 IL36AQ9UHA7 158 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 XPO7Q9UIA9 1087 aaKnown RBP6.04□□□□□ -1.44
CPSF7-222ENST00000544585 PCDHA7Q9UN72 937 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 FADS3Q9Y5Q0 445 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 NOTCH2Q04721 2471 aa6.04□□□□□ -1.44
CPSF7-222ENST00000544585 TRPM6Q9BX84 2022 aa6.03□□□□□ -1.44
CPSF7-222ENST00000544585 CXorf51AA0A1B0GTR3 108 aa6.03□□□□□ -1.44
CPSF7-222ENST00000544585 M0QYV0 167 aa6.03□□□□□ -1.44
CPSF7-222ENST00000544585 P4HA2O15460 535 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms