RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 SLC6A12P48065 614 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 LBX1P52954 281 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 CSE1LP55060 971 aaKnown RBP2.05□□□□□ -2.08
KNTC1-213ENST00000542727 POLR2LP62875 67 aaKnown RBP2.05□□□□□ -2.08
KNTC1-213ENST00000542727 GCNT1Q02742 428 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 PRKCZQ05513 592 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 CALD1Q05682 793 aaKnown RBP2.05□□□□□ -2.08
KNTC1-213ENST00000542727 TAF10Q12962 218 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 ALCAMQ13740 583 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 SNTB1Q13884 538 aaKnown RBP2.05□□□□□ -2.08
KNTC1-213ENST00000542727 HERC3Q15034 1050 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 ODF4Q2M2E3 257 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 MCMDC2Q4G0Z9 681 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 SYT14P1Q58G82 188 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 C9orf152Q5JTZ5 239 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 SPDYCQ5MJ68 293 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 KRT39Q6A163 491 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 PWWP2BQ6NUJ5 590 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 LINGO4Q6UY18 593 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 Q6ZSR9 355 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 BRINP3Q76B58 766 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 PLPPR4Q7Z2D5 763 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 NUP54Q7Z3B4 507 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 CENPVQ7Z7K6 275 aaPredicted RBP2.05□□□□□ -2.08
KNTC1-213ENST00000542727 LGI2Q8N0V4 545 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 CCDC89Q8N998 374 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 LINC00615Q96LM1 132 aaPredicted RBP2.05□□□□□ -2.08
KNTC1-213ENST00000542727 NECTIN4Q96NY8 510 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 FOXN4Q96NZ1 517 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 ZNF300Q96RE9 604 aaPredicted RBP2.05□□□□□ -2.08
KNTC1-213ENST00000542727 FNBP1Q96RU3 617 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 RAD9AQ99638 391 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 CCDC3Q9BQI4 270 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 GPR88Q9GZN0 384 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 NOL11Q9H8H0 719 aaKnown RBP2.05□□□□□ -2.08
KNTC1-213ENST00000542727 GKN1Q9NS71 199 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 FGF21Q9NSA1 209 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 PLCXD1Q9NUJ7 323 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 ZNF701Q9NV72 531 aaPredicted RBP2.05□□□□□ -2.08
KNTC1-213ENST00000542727 PRMT7Q9NVM4 692 aaPredicted RBP2.05□□□□□ -2.08
KNTC1-213ENST00000542727 TBC1D7Q9P0N9 293 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 TMEM181Q9P2C4 612 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 WDR35Q9P2L0 1181 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 MORF4L1Q9UBU8 362 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 CSAG2Q9Y5P2 127 aa2.05□□□□□ -2.08
KNTC1-213ENST00000542727 A0A087WW49 117 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 TCRBV21S2A2A0A5A6 115 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 TRBC2A0A5B9 178 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 SYNDIG1LA6NDD5 238 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 ZNF195O14628 629 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 RNASEH1O60930 286 aaKnown RBP2.04□□□□□ -2.08
KNTC1-213ENST00000542727 SLCO2B1O94956 709 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 AP2A2O94973 939 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 CELF2O95319 508 aaKnown RBP2.04□□□□□ -2.08
KNTC1-213ENST00000542727 GGPS1O95749 300 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 ADRB2P07550 413 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 RAB40ALP0C0E4 278 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 OR52Z1P0C646 297 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 DANCRP0C864 163 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 CEBPBP17676 345 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 CA6P23280 308 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 CPT2P23786 658 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 CSTF2P33240 577 aaKnown RBP eCLIP2.04□□□□□ -2.08
KNTC1-213ENST00000542727 MAGEA11P43364 429 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 NUCB1Q02818 461 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 RBPJQ06330 500 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 E2F5Q15329 346 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 CA9Q16790 459 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 VWC2Q2TAL6 325 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 UGT3A2Q3SY77 523 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 SLC25A53Q5H9E4 307 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 ERMARDQ5T6L9 678 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 C20orf194Q5TEA3 1177 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 LCN1P1Q5VSP4 162 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 TMEM207Q6UWW9 146 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 DET1Q7L5Y6 550 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 PRPF39Q86UA1 669 aaKnown RBP2.04□□□□□ -2.08
KNTC1-213ENST00000542727 HOGA1Q86XE5 327 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 RAB42Q8N4Z0 105 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 ANKRD13CQ8N6S4 541 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 NIPA2Q8N8Q9 360 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 GPRC5AQ8NFJ5 357 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 OR6J1Q8NGC5 347 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 OR4K1Q8NGD4 311 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 OR13C3Q8NGS6 347 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 OR2T11Q8NH01 316 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 PIGBQ92521 554 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 DHX58Q96C10 678 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 OTUB1Q96FW1 271 aaPredicted RBP2.04□□□□□ -2.08
KNTC1-213ENST00000542727 FAM20AQ96MK3 541 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 ZNF558Q96NG5 402 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 PASKQ96RG2 1323 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 PRRG4Q9BZD6 226 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 P2RY12Q9H244 342 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 PPANQ9NQ55 473 aaKnown RBP2.04□□□□□ -2.08
KNTC1-213ENST00000542727 PIH1D3Q9NQM4 214 aaKnown RBP2.04□□□□□ -2.08
KNTC1-213ENST00000542727 FAM207AQ9NSI2 230 aaPredicted RBP2.04□□□□□ -2.08
KNTC1-213ENST00000542727 NKIRAS2Q9NYR9 191 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 FLRT3Q9NZU0 649 aa2.04□□□□□ -2.08
KNTC1-213ENST00000542727 SWAP70Q9UH65 585 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms