RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 NPRL3Q12980 569 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 EFNB3Q15768 340 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 KLHL26Q53HC5 615 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 FNBP1LQ5T0N5 605 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 MFSD12Q6NUT3 480 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 PLBD1Q6P4A8 553 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 TMEM270Q6UE05 265 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 Q6ZSV7 163 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 TMPRSS11FQ6ZWK6 438 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 KCTD9Q7L273 389 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 FOXP4Q8IVH2 680 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 SLC38A9Q8NBW4 561 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 SMRP1Q8NCR6 262 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 LPCAT1Q8NF37 534 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 NCOA7Q8NI08 942 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 BBS10Q8TAM1 723 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 HMGCLL1Q8TB92 370 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 THAP6Q8TBB0 222 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 NSMAFQ92636 917 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 PHF21BQ96EK2 531 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 LRRC3BQ96PB8 259 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 OR1F2PQ96R84 312 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 CPNE1Q99829 537 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 LMF2Q9BU23 707 aaKnown RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 CDK19Q9BWU1 502 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 SEZ6LQ9BYH1 1024 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 PANK2Q9BZ23 570 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 PRRG4Q9BZD6 226 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 ABCG8Q9H221 673 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 KCNN2Q9H2S1 579 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 SNX25Q9H3E2 840 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 DPAGT1Q9H3H5 408 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 AKIRIN1Q9H9L7 192 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 IARS2Q9NSE4 1012 aaKnown RBP4.04□□□□□ -1.76
SNHG1-217ENST00000541578 FBXL5Q9UKA1 691 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 GMEB2Q9UKD1 530 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 FBXW2Q9UKT8 454 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 RNF150Q9ULK6 438 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 STX8Q9UNK0 236 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 PROCRQ9UNN8 238 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 TULP4Q9NRJ4 1543 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 USP6P35125 1406 aa4.04□□□□□ -1.76
SNHG1-217ENST00000541578 PCNTO95613 3336 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 C13orf42A0A1B0GVH6 325 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 A0A1W2PPM1 405 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 KRT87PA6NCN2 255 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 I6L893 689 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-217ENST00000541578 J3KR12 359 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 ACOT8O14734 319 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 TO15178 435 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 AP5Z1O43299 807 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 NDUFS7O75251 213 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 BMP10O95393 424 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 DANCRP0C864 163 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 UROSP10746 265 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 DESP17661 470 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 HSD17B3P37058 310 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 MAPK12P53778 367 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 TPD52P55327 224 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-217ENST00000541578 CLDN20P56880 219 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 COG7P83436 770 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 PRKCZQ05513 592 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 DSC1Q08554 894 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 CDO1Q16878 200 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 TMEM35AQ53FP2 167 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 IFI44LQ53G44 452 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.03□□□□□ -1.76
SNHG1-217ENST00000541578 CAPRIN2Q6IMN6 1127 aaKnown RBP4.03□□□□□ -1.76
SNHG1-217ENST00000541578 CCNI2Q6ZMN8 369 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-217ENST00000541578 CATSPER4Q7RTX7 472 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 FAM219AQ8IW50 185 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 HSCBQ8IWL3 235 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 CFAP206Q8IYR0 622 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 OR14A16Q8NHC5 309 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 ST7LQ8TDW4 575 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 WFIKKN2Q8TEU8 576 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 SEMA4DQ92854 862 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 ST6GALNAC6Q969X2 333 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 ZNF582Q96NG8 517 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-217ENST00000541578 MUS81Q96NY9 551 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 ATP6V0BQ99437 205 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 FEVQ99581 238 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 LRMDAQ9H2I8 198 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 DNAJC17Q9NVM6 304 aaKnown RBP4.03□□□□□ -1.76
SNHG1-217ENST00000541578 TXNDC16Q9P2K2 825 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 TINAGQ9UJW2 476 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 AGTPBP1Q9UPW5 1226 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 AMDHD2Q9Y303 409 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 NME7Q9Y5B8 376 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 COL5A2P05997 1499 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-217ENST00000541578 PIK3C2GO75747 1445 aa4.03□□□□□ -1.76
SNHG1-217ENST00000541578 BTAF1O14981 1849 aa4.02□□□□□ -1.77
SNHG1-217ENST00000541578 RGPD5Q99666 1765 aa4.02□□□□□ -1.77
SNHG1-217ENST00000541578 IGHV4-28A0A0C4DH34 117 aa4.02□□□□□ -1.77
SNHG1-217ENST00000541578 PRSS51A0A1B0GVH4 220 aa4.02□□□□□ -1.77
SNHG1-217ENST00000541578 MED19A0JLT2 244 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-217ENST00000541578 SLC30A4O14863 429 aa4.02□□□□□ -1.77
SNHG1-217ENST00000541578 SLC22A3O75751 556 aa4.02□□□□□ -1.77
SNHG1-217ENST00000541578 RAD51DO75771 328 aa4.02□□□□□ -1.77
SNHG1-217ENST00000541578 STAM2O75886 525 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms