RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 HCAR2Q8TDS4 363 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 FBXL8Q96CD0 374 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 APIPQ96GX9 242 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 TSSK3Q96PN8 268 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 FAM83CQ9BQN1 747 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 BDH2Q9BUT1 245 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 THUMPD3Q9BV44 507 aaKnown RBP13□□□□□ -0.33
VPS33B-202ENST00000535906 RAD18Q9NS91 495 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 ATXN10Q9UBB4 475 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 RWDD3Q9Y3V2 267 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 FADS3Q9Y5Q0 445 aa13□□□□□ -0.33
VPS33B-202ENST00000535906 TCF20Q9UGU0 1960 aaKnown RBP12.99□□□□□ -0.33
VPS33B-202ENST00000535906 ALPK3Q96L96 1907 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 CDH1P12830 882 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 GGT1P19440 569 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 CD22P20273 847 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 CAPGP40121 348 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 CLDN8P56748 225 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 ST8SIA6P61647 398 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 CYBRD1Q53TN4 286 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 FRG2Q64ET8 278 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 ERAP2Q6P179 960 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 TMC5Q6UXY8 1006 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 CYP2U1Q7Z449 544 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 ADGRD2Q7Z7M1 963 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 RIMKLAQ8IXN7 391 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 ETFBKMTQ8IXQ9 262 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 MAGEE2Q8TD90 523 aaPredicted RBP12.99□□□□□ -0.33
VPS33B-202ENST00000535906 SMG7Q92540 1137 aaKnown RBP12.99□□□□□ -0.33
VPS33B-202ENST00000535906 TMEM159Q96B96 161 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 FBXL20Q96IG2 436 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 EGLN2Q96KS0 407 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 RNF145Q96MT1 663 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 FRG2BQ96QU4 278 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 OCEL1Q9H607 264 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.99□□□□□ -0.33
VPS33B-202ENST00000535906 SLC27A6Q9Y2P4 619 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 LRRK1Q38SD2 2015 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 WNT9AO14904 365 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 ATG13O75143 517 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 SEC24DO94855 1032 aaPredicted RBP12.99□□□□□ -0.33
VPS33B-202ENST00000535906 B3GALT4O96024 378 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 ADH1CP00326 375 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 SDC1P18827 310 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 PRPH2P23942 346 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 PDHA2P29803 388 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 PRLHRP49683 370 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 ESRRGP62508 458 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 CYP4F3Q08477 520 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 SYTL3Q4VX76 610 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 ABRAXAS1Q6UWZ7 409 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 PATL1Q86TB9 770 aaKnown RBP12.99□□□□□ -0.33
VPS33B-202ENST00000535906 SFTPA1Q8IWL2 248 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 HOMEZQ8IX15 550 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 VN1R2Q8NFZ6 395 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 OR2T12Q8NG77 320 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 WFIKKN2Q8TEU8 576 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 CMTM7Q96FZ5 175 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 VPS50Q96JG6 964 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 GULP1Q9UBP9 304 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 PCDHB14Q9Y5E9 798 aa12.99□□□□□ -0.33
VPS33B-202ENST00000535906 NUP210Q8TEM1 1887 aaPredicted RBP12.98□□□□□ -0.33
VPS33B-202ENST00000535906 SLC5A10A0PJK1 596 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 QSOX1O00391 747 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 CLIC3O95833 236 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 JUPP14923 745 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 AMD1P17707 334 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 MAP4P27816 1152 aaKnown RBP12.98□□□□□ -0.33
VPS33B-202ENST00000535906 RUNDC3AQ59EK9 446 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 TMEM220Q6QAJ8 160 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 USP51Q70EK9 711 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 ARHGAP22Q7Z5H3 698 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 GPR141Q7Z602 305 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 THOC6Q86W42 341 aaKnown RBP12.98□□□□□ -0.33
VPS33B-202ENST00000535906 ZNF548Q8NEK5 533 aaPredicted RBP12.98□□□□□ -0.33
VPS33B-202ENST00000535906 APOLD1Q96LR9 279 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 CCM2Q9BSQ5 444 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 SERHLQ9NQF3 203 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 PPT2Q9UMR5 302 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 XIRP2A4UGR9 3374 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 TRBV5-3A0A0A0MS03 114 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 GRXCR1A8MXD5 290 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 E7EQ34 232 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 K7ESM1 405 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 PLK4O00444 970 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 LRATO95237 230 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 SOD1P00441 154 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 ANXA6P08133 673 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 PRPS2P11908 318 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 EN2P19622 333 aaPredicted RBP12.98□□□□□ -0.33
VPS33B-202ENST00000535906 PBLDP30039 288 aaPredicted RBP12.98□□□□□ -0.33
VPS33B-202ENST00000535906 BDKRB1P46663 353 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 IRF8Q02556 426 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 GAB4Q2WGN9 574 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 ZBED5Q49AG3 693 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 FAM78AQ5JUQ0 283 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 C9orf64Q5T6V5 341 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 AGTRAPQ6RW13 159 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 UBE2Q1Q7Z7E8 422 aa12.98□□□□□ -0.33
VPS33B-202ENST00000535906 TRIM74Q86UV6 250 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms