RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 MED4Q9NPJ6 270 aa15.05■□□□□ -0
CNN1-202ENST00000535659 CCDC177Q9NQR7 707 aaPredicted RBP15.05■□□□□ -0
CNN1-202ENST00000535659 COPG2Q9UBF2 871 aa15.05■□□□□ -0
CNN1-202ENST00000535659 PCDHB11Q9Y5F2 797 aa15.05■□□□□ -0
CNN1-202ENST00000535659 TNPO3Q9Y5L0 923 aaKnown RBP15.05■□□□□ -0
CNN1-202ENST00000535659 A8MT66 165 aa15.04■□□□□ -0
CNN1-202ENST00000535659 CAPN5O15484 640 aaPredicted RBP15.04■□□□□ -0
CNN1-202ENST00000535659 HOXB3P14651 431 aaPredicted RBP15.04■□□□□ -0
CNN1-202ENST00000535659 NPPBP16860 134 aa15.04■□□□□ -0
CNN1-202ENST00000535659 HSPA7P48741 367 aa15.04■□□□□ -0
CNN1-202ENST00000535659 AGTR2P50052 363 aa15.04■□□□□ -0
CNN1-202ENST00000535659 PRKAA2P54646 552 aa15.04■□□□□ -0
CNN1-202ENST00000535659 TBPL1P62380 186 aa15.04■□□□□ -0
CNN1-202ENST00000535659 NFKB2Q00653 900 aa15.04■□□□□ -0
CNN1-202ENST00000535659 PCBP2Q15366 365 aaKnown RBP eCLIP15.04■□□□□ -0
CNN1-202ENST00000535659 SF1Q15637 639 aaKnown RBP15.04■□□□□ -0
CNN1-202ENST00000535659 THEMIS2Q5TEJ8 643 aa15.04■□□□□ -0
CNN1-202ENST00000535659 IRGCQ6NXR0 463 aa15.04■□□□□ -0
CNN1-202ENST00000535659 TMEM71Q6P5X7 295 aa15.04■□□□□ -0
CNN1-202ENST00000535659 RAB44Q7Z6P3 723 aaPredicted RBP15.04■□□□□ -0
CNN1-202ENST00000535659 SLCO6A1Q86UG4 719 aa15.04■□□□□ -0
CNN1-202ENST00000535659 THOC6Q86W42 341 aaKnown RBP15.04■□□□□ -0
CNN1-202ENST00000535659 KLHDC8AQ8IYD2 350 aa15.04■□□□□ -0
CNN1-202ENST00000535659 FLVCR1-AS1Q8TAF5 88 aa15.04■□□□□ -0
CNN1-202ENST00000535659 UBTD2Q8WUN7 234 aa15.04■□□□□ -0
CNN1-202ENST00000535659 MIPEPQ99797 713 aa15.04■□□□□ -0
CNN1-202ENST00000535659 RTKNQ9BST9 563 aa15.04■□□□□ -0
CNN1-202ENST00000535659 ABCF3Q9NUQ8 709 aa15.04■□□□□ -0
CNN1-202ENST00000535659 OXSMQ9NWU1 459 aa15.04■□□□□ -0
CNN1-202ENST00000535659 ATXN7L1Q9ULK2 861 aaPredicted RBP15.04■□□□□ -0
CNN1-202ENST00000535659 SLC22A14Q9Y267 594 aa15.04■□□□□ -0
CNN1-202ENST00000535659 ASXL3Q9C0F0 2248 aa15.04■□□□□ -0
CNN1-202ENST00000535659 SPAARA0A1B0GVQ0 90 aa15.03■□□□□ -0
CNN1-202ENST00000535659 WDR47O94967 919 aa15.03■□□□□ -0
CNN1-202ENST00000535659 SIX3O95343 332 aaPredicted RBP15.03■□□□□ -0
CNN1-202ENST00000535659 C9P02748 559 aa15.03■□□□□ -0
CNN1-202ENST00000535659 UGT2B7P16662 529 aa15.03■□□□□ -0
CNN1-202ENST00000535659 IMPDH1P20839 514 aa15.03■□□□□ -0
CNN1-202ENST00000535659 KCNA4P22459 653 aa15.03■□□□□ -0
CNN1-202ENST00000535659 HPDP32754 393 aaPredicted RBP15.03■□□□□ -0
CNN1-202ENST00000535659 SIM1P81133 766 aaPredicted RBP15.03■□□□□ -0
CNN1-202ENST00000535659 PRDX1Q06830 199 aaKnown RBP15.03■□□□□ -0
CNN1-202ENST00000535659 METTL2BQ6P1Q9 378 aaKnown RBP15.03■□□□□ -0
CNN1-202ENST00000535659 LCTLQ6UWM7 567 aa15.03■□□□□ -0
CNN1-202ENST00000535659 ANKRD42Q8N9B4 389 aa15.03■□□□□ -0
CNN1-202ENST00000535659 TGM7Q96PF1 710 aa15.03■□□□□ -0
CNN1-202ENST00000535659 OR4K3Q96R72 315 aa15.03■□□□□ -0
CNN1-202ENST00000535659 SELENOSQ9BQE4 189 aa15.03■□□□□ -0
CNN1-202ENST00000535659 NUDT22Q9BRQ3 303 aa15.03■□□□□ -0
CNN1-202ENST00000535659 ACAT2Q9BWD1 397 aa15.03■□□□□ -0
CNN1-202ENST00000535659 SYNDIG1Q9H7V2 258 aa15.03■□□□□ -0
CNN1-202ENST00000535659 NKIRAS1Q9NYS0 192 aa15.03■□□□□ -0
CNN1-202ENST00000535659 TAC3Q9UHF0 121 aa15.03■□□□□ -0
CNN1-202ENST00000535659 POMT2Q9UKY4 750 aa15.03■□□□□ -0
CNN1-202ENST00000535659 PCNX2A6NKB5 2137 aa15.03■□□□□ -0
CNN1-202ENST00000535659 K7EPI3 171 aa15.02■□□□□ -0
CNN1-202ENST00000535659 GIPC1O14908 333 aa15.02■□□□□ -0
CNN1-202ENST00000535659 CCNT2O60583 730 aaKnown RBP15.02■□□□□ -0
CNN1-202ENST00000535659 DKK1O94907 266 aa15.02■□□□□ -0
CNN1-202ENST00000535659 KCNK5O95279 499 aa15.02■□□□□ -0
CNN1-202ENST00000535659 DHRS4L1P0CG22 281 aa15.02■□□□□ -0
CNN1-202ENST00000535659 EEF1DP29692 281 aaKnown RBP15.02■□□□□ -0
CNN1-202ENST00000535659 ALDH3A1P30838 453 aa15.02■□□□□ -0
CNN1-202ENST00000535659 CSF2RBP32927 897 aa15.02■□□□□ -0
CNN1-202ENST00000535659 NOVA1P51513 510 aaKnown RBP15.02■□□□□ -0
CNN1-202ENST00000535659 PPP1CAP62136 330 aa15.02■□□□□ -0
CNN1-202ENST00000535659 HERVK_113P63132 956 aa15.02■□□□□ -0
CNN1-202ENST00000535659 SPIDRQ14159 915 aa15.02■□□□□ -0
CNN1-202ENST00000535659 PCLAFQ15004 111 aa15.02■□□□□ -0
CNN1-202ENST00000535659 SLC5A12Q1EHB4 618 aa15.02■□□□□ -0
CNN1-202ENST00000535659 PRAMEF13Q5VWM6 474 aa15.02■□□□□ -0
CNN1-202ENST00000535659 SPESP1Q6UW49 350 aa15.02■□□□□ -0
CNN1-202ENST00000535659 ZNF574Q6ZN55 896 aaPredicted RBP15.02■□□□□ -0
CNN1-202ENST00000535659 TMPRSS9Q7Z410 1059 aa15.02■□□□□ -0
CNN1-202ENST00000535659 C10orf107Q8IVU9 208 aa15.02■□□□□ -0
CNN1-202ENST00000535659 CD180Q99467 661 aa15.02■□□□□ -0
CNN1-202ENST00000535659 HAUS8Q9BT25 410 aa15.02■□□□□ -0
CNN1-202ENST00000535659 ERVK-6Q9BXR3 956 aa15.02■□□□□ -0
CNN1-202ENST00000535659 CAPS2Q9BXY5 557 aa15.02■□□□□ -0
CNN1-202ENST00000535659 ZMYND15Q9H091 742 aa15.02■□□□□ -0
CNN1-202ENST00000535659 DNAJC11Q9NVH1 559 aa15.02■□□□□ -0
CNN1-202ENST00000535659 PDP2Q9P2J9 529 aa15.02■□□□□ -0
CNN1-202ENST00000535659 OPTCQ9UBM4 332 aa15.02■□□□□ -0
CNN1-202ENST00000535659 APOBEC2Q9Y235 224 aaKnown RBP15.02■□□□□ -0
CNN1-202ENST00000535659 ASB1Q9Y576 335 aa15.02■□□□□ -0
CNN1-202ENST00000535659 KCNE2Q9Y6J6 123 aa15.02■□□□□ -0
CNN1-202ENST00000535659 RP1P56715 2156 aa15.02■□□□□ -0
CNN1-202ENST00000535659 ANKRD12Q6UB98 2062 aa15.02■□□□□ -0
CNN1-202ENST00000535659 LRRC14BA6NHZ5 514 aa15.02□□□□□ -0.01
CNN1-202ENST00000535659 TRIM13O60858 407 aa15.02□□□□□ -0.01
CNN1-202ENST00000535659 FKBP9O95302 570 aa15.02□□□□□ -0.01
CNN1-202ENST00000535659 BPGMP07738 259 aa15.02□□□□□ -0.01
CNN1-202ENST00000535659 FTH1P19P0C7X4 201 aa15.02□□□□□ -0.01
CNN1-202ENST00000535659 MPSTP25325 297 aa15.02□□□□□ -0.01
CNN1-202ENST00000535659 PSMB5P28074 263 aa15.02□□□□□ -0.01
CNN1-202ENST00000535659 CMPK1P30085 196 aa15.02□□□□□ -0.01
CNN1-202ENST00000535659 SERPINB4P48594 390 aa15.02□□□□□ -0.01
CNN1-202ENST00000535659 GFERP55789 205 aa15.02□□□□□ -0.01
CNN1-202ENST00000535659 DNAJB13P59910 316 aa15.02□□□□□ -0.01
CNN1-202ENST00000535659 PPP2R2AP63151 447 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms