RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 GPS2Q13227 327 aa20.53■□□□□ 0.88
PKP3-211ENST00000534401 SP140Q13342 867 aa20.53■□□□□ 0.88
PKP3-211ENST00000534401 SF1Q15637 639 aaKnown RBP20.53■□□□□ 0.88
PKP3-211ENST00000534401 PRAMEF17Q5VTA0 474 aa20.53■□□□□ 0.88
PKP3-211ENST00000534401 ZNF385CQ66K41 422 aaPredicted RBP20.53■□□□□ 0.88
PKP3-211ENST00000534401 TMEM207Q6UWW9 146 aa20.53■□□□□ 0.88
PKP3-211ENST00000534401 UBE2R2Q712K3 238 aaPredicted RBP20.53■□□□□ 0.88
PKP3-211ENST00000534401 RELL1Q8IUW5 271 aa20.53■□□□□ 0.88
PKP3-211ENST00000534401 TMEM126BQ8IUX1 230 aa20.53■□□□□ 0.88
PKP3-211ENST00000534401 BBC3Q96PG8 261 aaPredicted RBP20.53■□□□□ 0.88
PKP3-211ENST00000534401 GPN2Q9H9Y4 310 aaPredicted RBP20.53■□□□□ 0.88
PKP3-211ENST00000534401 INTS7Q9NVH2 962 aaKnown RBP20.53■□□□□ 0.88
PKP3-211ENST00000534401 ADAMTS6Q9UKP5 1117 aa20.53■□□□□ 0.88
PKP3-211ENST00000534401 PLCL2Q9UPR0 1127 aa20.53■□□□□ 0.88
PKP3-211ENST00000534401 PDE10AQ9Y233 779 aa20.53■□□□□ 0.88
PKP3-211ENST00000534401 MDC1Q14676 2089 aaKnown RBP20.53■□□□□ 0.88
PKP3-211ENST00000534401 CTAGE15A4D2H0 777 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 ZNF839A8K0R7 811 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 C21orf140B9A014 251 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 ERVH48-1M5A8F1 160 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 CCNYL3P0C7X3 344 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 CTAGE8P0CG41 777 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 PSMB5P28074 263 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 IL2P60568 153 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 RELAQ04206 551 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 SOWAHCQ53LP3 525 aaPredicted RBP20.52■□□□□ 0.88
PKP3-211ENST00000534401 CTAGE6Q86UF2 777 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 TAX1BP1Q86VP1 789 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 CTAGE4Q8IX94 777 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 DSELQ8IZU8 1212 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 GPATCH11Q8N954 259 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 ZSCAN1Q8NBB4 408 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 KIAA1143Q96AT1 154 aaPredicted RBP20.52■□□□□ 0.88
PKP3-211ENST00000534401 PARVBQ9HBI1 364 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 PCMTD2Q9NV79 361 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 EURLQ9NYK6 297 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 CROTQ9UKG9 612 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 KLHL20Q9Y2M5 609 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 AP1M2Q9Y6Q5 423 aa20.52■□□□□ 0.88
PKP3-211ENST00000534401 BAHCC1Q9P281 2608 aa20.52■□□□□ 0.87
PKP3-211ENST00000534401 PIEZO2Q9H5I5 2752 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 FAM95CA0A1B0GW59 222 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 OR2A25A4D2G3 310 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 E7EQ34 232 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 MEN1O00255 615 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 ATXN7O15265 892 aaPredicted RBP20.51■□□□□ 0.87
PKP3-211ENST00000534401 ITGB2P05107 769 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 CAPN1P07384 714 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 CTSBP07858 339 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 IMPA1P29218 277 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 PGGT1BP53609 377 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 TAS2R39P59534 338 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 PDAP1Q13442 181 aaKnown RBP20.51■□□□□ 0.87
PKP3-211ENST00000534401 COL9A2Q14055 689 aaPredicted RBP20.51■□□□□ 0.87
PKP3-211ENST00000534401 MCATQ8IVS2 390 aaKnown RBP20.51■□□□□ 0.87
PKP3-211ENST00000534401 MCOLN3Q8TDD5 553 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 CT55Q8WUE5 264 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 LINGO1Q96FE5 620 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 VPS39Q96JC1 886 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 CCDC138Q96M89 665 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 CPNE1Q99829 537 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 SPRTNQ9H040 489 aaPredicted RBP20.51■□□□□ 0.87
PKP3-211ENST00000534401 POPDC3Q9HBV1 291 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 ANKMY1Q9P2S6 941 aa20.51■□□□□ 0.87
PKP3-211ENST00000534401 IGKV1-8A0A0C4DH67 115 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 ZNF891A8MT65 544 aaPredicted RBP20.5■□□□□ 0.87
PKP3-211ENST00000534401 ZNF749O43361 778 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 CTSVO60911 334 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 PIAS1O75925 651 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 HBQ1P09105 142 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 ZNF37AP17032 561 aaPredicted RBP20.5■□□□□ 0.87
PKP3-211ENST00000534401 CYP2A7P20853 494 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 YBX1P67809 324 aaKnown RBP20.5■□□□□ 0.87
PKP3-211ENST00000534401 PRDX1Q06830 199 aaKnown RBP20.5■□□□□ 0.87
PKP3-211ENST00000534401 NAA25Q14CX7 972 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 ZC3H12BQ5HYM0 836 aaKnown RBP20.5■□□□□ 0.87
PKP3-211ENST00000534401 ZNF425Q6IV72 752 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 RHBDD2Q6NTF9 364 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 TLDC1Q6P9B6 456 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 MYO1HQ8N1T3 1032 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 CDKL2Q92772 493 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 RNF31Q96EP0 1072 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 MIPEPQ99797 713 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 GPR87Q9BY21 358 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 ACTR5Q9H9F9 607 aaPredicted RBP20.5■□□□□ 0.87
PKP3-211ENST00000534401 SLC6A20Q9NP91 592 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.5■□□□□ 0.87
PKP3-211ENST00000534401 STOX2Q9P2F5 926 aaPredicted RBP20.5■□□□□ 0.87
PKP3-211ENST00000534401 KCND3Q9UK17 655 aa20.5■□□□□ 0.87
PKP3-211ENST00000534401 NOVA2Q9UNW9 492 aaKnown RBP20.5■□□□□ 0.87
PKP3-211ENST00000534401 TK2O00142 265 aa20.49■□□□□ 0.87
PKP3-211ENST00000534401 OR2B3O76000 313 aa20.49■□□□□ 0.87
PKP3-211ENST00000534401 ONECUT2O95948 504 aa20.49■□□□□ 0.87
PKP3-211ENST00000534401 TCN2P20062 427 aa20.49■□□□□ 0.87
PKP3-211ENST00000534401 ECHS1P30084 290 aa20.49■□□□□ 0.87
PKP3-211ENST00000534401 CMPK1P30085 196 aa20.49■□□□□ 0.87
PKP3-211ENST00000534401 DLSTP36957 453 aa20.49■□□□□ 0.87
PKP3-211ENST00000534401 ABATP80404 500 aa20.49■□□□□ 0.87
PKP3-211ENST00000534401 POU4F1Q01851 419 aa20.49■□□□□ 0.87
PKP3-211ENST00000534401 DNASE1L3Q13609 305 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms