RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ZFATQ9P243 1243 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 CORO1CQ9ULV4 474 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-210ENST00000532935 COL6A6A6NMZ7 2263 aa14.78□□□□□ -0.04
CPSF1-210ENST00000532935 ZNF839A8K0R7 811 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 TARM1B6A8C7 271 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 EIF3HO15372 352 aaKnown RBP eCLIP14.77□□□□□ -0.05
CPSF1-210ENST00000532935 ZBTB14O43829 449 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 SLC16A8O95907 504 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 SYF2O95926 243 aaKnown RBP14.77□□□□□ -0.05
CPSF1-210ENST00000532935 PRB1P04280 392 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 CTSBP07858 339 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 HBQ1P09105 142 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 HSD17B2P37059 387 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 GRIA3P42263 894 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 RGS4P49798 205 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 PNLIPRP1P54315 467 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 WHAMMP3Q1A5X7 153 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 ATP1A1-AS1Q5TC04 95 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 HECTD2Q5U5R9 776 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 LCN10Q6JVE6 187 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 UBE2R2Q712K3 238 aaPredicted RBP14.77□□□□□ -0.05
CPSF1-210ENST00000532935 MCATQ8IVS2 390 aaKnown RBP14.77□□□□□ -0.05
CPSF1-210ENST00000532935 SYTL1Q8IYJ3 562 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 OR2L3Q8NG85 312 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 OR2A1Q8NGT9 310 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 SMPDL3AQ92484 453 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 ZNF592Q92610 1267 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 ZUFSPQ96AP4 578 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 RUFY1Q96T51 708 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 ARHGAP9Q9BRR9 750 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 CHST8Q9H2A9 424 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 ACTL8Q9H568 366 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 EURLQ9NYK6 297 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 VWA7Q9Y334 891 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 KLK4Q9Y5K2 254 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 PSAT1Q9Y617 370 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 AP1M2Q9Y6Q5 423 aa14.77□□□□□ -0.05
CPSF1-210ENST00000532935 ZSCAN9O15535 394 aaPredicted RBP14.76□□□□□ -0.05
CPSF1-210ENST00000532935 CREG1O75629 220 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 C8GP07360 202 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 FDXRP22570 491 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 PTPN4P29074 926 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 CMPK1P30085 196 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 RPA3P35244 121 aaPredicted RBP14.76□□□□□ -0.05
CPSF1-210ENST00000532935 PLTPP55058 493 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 RPS15P62841 145 aaKnown RBP14.76□□□□□ -0.05
CPSF1-210ENST00000532935 CAV1Q03135 178 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 PDAP1Q13442 181 aaKnown RBP14.76□□□□□ -0.05
CPSF1-210ENST00000532935 ERV3-1Q14264 604 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 PTCHD3Q3KNS1 767 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 ZC3H12BQ5HYM0 836 aaKnown RBP14.76□□□□□ -0.05
CPSF1-210ENST00000532935 FAM45BPQ6NSW5 357 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 TLDC1Q6P9B6 456 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 BORAQ6PGQ7 559 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 SUSD1Q6UWL2 747 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 CAPN12Q6ZSI9 719 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 STRA8Q7Z7C7 330 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 SLC26A11Q86WA9 606 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 PALM2Q8IXS6 379 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 ZNF655Q8N720 491 aaPredicted RBP14.76□□□□□ -0.05
CPSF1-210ENST00000532935 EXD3Q8N9H8 876 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 PPFIBP2Q8ND30 876 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 FAM45AQ8TCE6 357 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 ZNF480Q8WV37 535 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 LINGO1Q96FE5 620 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 OLFM1Q99784 485 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 ACAT2Q9BWD1 397 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 SEMA4CQ9C0C4 833 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 IRAK4Q9NWZ3 460 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 ADAMTS6Q9UKP5 1117 aa14.76□□□□□ -0.05
CPSF1-210ENST00000532935 TLN1Q9Y490 2541 aaKnown RBP14.75□□□□□ -0.05
CPSF1-210ENST00000532935 E7ENX8 843 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 TSPAN12O95859 305 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 RECKO95980 971 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 FAM87AP0C7U9 286 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 SSTR1P30872 391 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 PGGT1BP53609 377 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 IL2P60568 153 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 RPS18P62269 152 aaKnown RBP14.75□□□□□ -0.05
CPSF1-210ENST00000532935 YBX1P67809 324 aaKnown RBP14.75□□□□□ -0.05
CPSF1-210ENST00000532935 SLC7A5Q01650 507 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 TAP2Q03519 686 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 TSTA3Q13630 321 aaPredicted RBP14.75□□□□□ -0.05
CPSF1-210ENST00000532935 NAA25Q14CX7 972 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 TRADDQ15628 312 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 DEFB109BQ30KR1 87 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 ZNF385CQ66K41 422 aaPredicted RBP14.75□□□□□ -0.05
CPSF1-210ENST00000532935 RHBDD2Q6NTF9 364 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 C8orf74Q6P047 294 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 ZDHHC24Q6UX98 284 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 ZC3HC1Q86WB0 502 aaKnown RBP14.75□□□□□ -0.05
CPSF1-210ENST00000532935 MYO1HQ8N1T3 1032 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 FBXO25Q8TCJ0 367 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 DLG3Q92796 817 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 MED8Q96G25 268 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 DPH2Q9BQC3 489 aaPredicted RBP14.75□□□□□ -0.05
CPSF1-210ENST00000532935 PHACTR1Q9C0D0 580 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 NSMCE4AQ9NXX6 385 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 SRPK3Q9UPE1 567 aa14.75□□□□□ -0.05
CPSF1-210ENST00000532935 FARSAQ9Y285 508 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms