RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 HSD3B1P14060 373 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 XPAP23025 273 aaPredicted RBP14.91□□□□□ -0.02
USH1C-207ENST00000527720 HSD3B2P26439 372 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 PTPN6P29350 595 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 TTKP33981 857 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 TRPC1P48995 793 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 IRF8Q02556 426 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 SRSF11Q05519 484 aaKnown RBP14.91□□□□□ -0.02
USH1C-207ENST00000527720 ABRQ12979 859 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 MTAPQ13126 283 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 PRAMEF9Q5VWM5 478 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 NOXRED1Q6NXP6 359 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 ENPP6Q6UWR7 440 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 DNAJC14Q6Y2X3 702 aaPredicted RBP14.91□□□□□ -0.02
USH1C-207ENST00000527720 NRSN1Q8IZ57 195 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 FBXO30Q8TB52 745 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 AURKBQ96GD4 344 aaPredicted RBP14.91□□□□□ -0.02
USH1C-207ENST00000527720 APIPQ96GX9 242 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 REXO5Q96IC2 774 aaKnown RBP14.91□□□□□ -0.02
USH1C-207ENST00000527720 PAWRQ96IZ0 340 aaKnown RBP14.91□□□□□ -0.02
USH1C-207ENST00000527720 CCDC138Q96M89 665 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 TSSK3Q96PN8 268 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 LRRK1Q38SD2 2015 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 G3V2T6 193 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 ATG13O75143 517 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 XYLBO75191 536 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 RECQL5O94762 991 aaPredicted RBP14.91□□□□□ -0.02
USH1C-207ENST00000527720 CST1P01037 141 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 THRBP10828 461 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 ITPKAP23677 461 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 PRLHRP49683 370 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 CDH15P55291 814 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 C21orf58P58505 322 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 ZBED5Q49AG3 693 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 GTDC1Q4AE62 458 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 PRSS36Q5K4E3 855 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 OTUD3Q5T2D3 398 aaPredicted RBP14.91□□□□□ -0.02
USH1C-207ENST00000527720 CCNYL2Q5T2Q4 361 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 GPR141Q7Z602 305 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 CLEC4FQ8N1N0 589 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 CYB5D2Q8WUJ1 264 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 TMEM159Q96B96 161 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 TBCDQ9BTW9 1192 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 ATG10Q9H0Y0 220 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 CARS2Q9HA77 564 aaKnown RBP14.91□□□□□ -0.02
USH1C-207ENST00000527720 USE1Q9NZ43 259 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 PPT2Q9UMR5 302 aa14.91□□□□□ -0.02
USH1C-207ENST00000527720 PSMD11O00231 422 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 TRMUO75648 421 aaKnown RBP14.9□□□□□ -0.02
USH1C-207ENST00000527720 SEC24DO94855 1032 aaPredicted RBP14.9□□□□□ -0.02
USH1C-207ENST00000527720 CTSLP07711 333 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 SYN1P17600 705 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 TACR1P25103 407 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 SLC5A2P31639 672 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 HNF4AP41235 474 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 KIR3DL1P43629 444 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 GJA8P48165 433 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 PON2Q15165 354 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 SYTL3Q4VX76 610 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 LPCAT2Q7L5N7 544 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 STK32CQ86UX6 486 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 THOC6Q86W42 341 aaKnown RBP14.9□□□□□ -0.02
USH1C-207ENST00000527720 ERI1Q8IV48 349 aaKnown RBP14.9□□□□□ -0.02
USH1C-207ENST00000527720 ADHFE1Q8IWW8 467 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 FAM86B1Q8N7N1 296 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 WDR20Q8TBZ3 569 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 SP7Q8TDD2 431 aaPredicted RBP14.9□□□□□ -0.02
USH1C-207ENST00000527720 WFIKKN2Q8TEU8 576 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 STARD8Q92502 1023 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 NELL1Q92832 810 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 GLYATL1Q969I3 302 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 TMIGD2Q96BF3 282 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 HIC2Q96JB3 615 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 APOLD1Q96LR9 279 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 SLC6A13Q9NSD5 602 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 KIAA1549LQ6ZVL6 1849 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 OR2AG2A6NM03 316 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 ARHGEF33A8MVX0 844 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 H0Y858 1186 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 H0YIV9 168 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 RFXANKO14593 260 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 CLIC3O95833 236 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 CATP04040 527 aaKnown RBP14.9□□□□□ -0.02
USH1C-207ENST00000527720 PCNAP12004 261 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 MMP12P39900 470 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 NKG7Q16617 165 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 PGS1Q32NB8 556 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 TTC23Q5W5X9 447 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 ERAP2Q6P179 960 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 SERPINA11Q86U17 422 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 PHACTR4Q8IZ21 702 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 OFCC1Q8IZS5 231 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 NCLNQ969V3 563 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 CCM2Q9BSQ5 444 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 EPHX3Q9H6B9 360 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 BRF2Q9HAW0 419 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 TIMMDC1Q9NPL8 285 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 SPATA6Q9NWH7 488 aaPredicted RBP14.9□□□□□ -0.02
USH1C-207ENST00000527720 VPS29Q9UBQ0 182 aa14.9□□□□□ -0.02
USH1C-207ENST00000527720 MAPRE3Q9UPY8 281 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms