RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 KIAA0040Q15053 153 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 SHHQ15465 462 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 CST6Q15828 149 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 CPSF6Q16630 551 aaKnown RBP eCLIP7.24□□□□□ -1.25
CASP4-204ENST00000524843 MAPKAPK3Q16644 382 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 RFTN2Q52LD8 501 aaPredicted RBP7.24□□□□□ -1.25
CASP4-204ENST00000524843 SFT2D3Q587I9 215 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.24□□□□□ -1.25
CASP4-204ENST00000524843 PAGE3Q5JUK9 113 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 LRIF1Q5T3J3 769 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 PIP5KL1Q5T9C9 394 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 INTS11Q5TA45 600 aaKnown RBP7.24□□□□□ -1.25
CASP4-204ENST00000524843 ATG9BQ674R7 924 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 ZNF776Q68DI1 518 aaPredicted RBP7.24□□□□□ -1.25
CASP4-204ENST00000524843 FAM109BQ6ICB4 259 aaPredicted RBP7.24□□□□□ -1.25
CASP4-204ENST00000524843 TANGO2Q6ICL3 276 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 KIAA1161Q6NSJ0 714 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 NEK5Q6P3R8 708 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 DLEU7Q6UYE1 221 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 PDZD3Q86UT5 571 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 LRRTM4Q86VH4 590 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 KIAA2013Q8IYS2 634 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 TBC1D21Q8IYX1 336 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 ST13P4Q8IZP2 240 aaPredicted RBP7.24□□□□□ -1.25
CASP4-204ENST00000524843 RAB42Q8N4Z0 105 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 ZNF366Q8N895 744 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 PAPD5Q8NDF8 572 aaKnown RBP7.24□□□□□ -1.25
CASP4-204ENST00000524843 OR9A1PQ8NGU1 263 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 FAM131CQ96AQ9 280 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 ITCHQ96J02 903 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 ZFYVE19Q96K21 471 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 NSMCE2Q96MF7 247 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 NECTIN4Q96NY8 510 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 HHIPQ96QV1 700 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 SLC39A3Q9BRY0 314 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 HAUS8Q9BT25 410 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 C9orf16Q9BUW7 83 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 SPATA9Q9BWV2 254 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 SGPP1Q9BX95 441 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 OSBPL11Q9BXB4 747 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 RAB11FIP5Q9BXF6 653 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 PCBD2Q9H0N5 130 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 RSPH9Q9H1X1 276 aaPredicted RBP7.24□□□□□ -1.25
CASP4-204ENST00000524843 KCNH6Q9H252 994 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 MTG2Q9H4K7 406 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 RMI1Q9H9A7 625 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 COPS7BQ9H9Q2 264 aaPredicted RBP7.24□□□□□ -1.25
CASP4-204ENST00000524843 SLC28A3Q9HAS3 691 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 PRSS16Q9NQE7 514 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 SPATA6Q9NWH7 488 aaPredicted RBP7.24□□□□□ -1.25
CASP4-204ENST00000524843 FAM120CQ9NX05 1096 aaKnown RBP7.24□□□□□ -1.25
CASP4-204ENST00000524843 SIRT5Q9NXA8 310 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 ADGRE2Q9UHX3 823 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 ANAPC2Q9UJX6 822 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 SCML1Q9UN30 329 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 SLC22A14Q9Y267 594 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 DNAH12Q6ZR08 3092 aa7.24□□□□□ -1.25
CASP4-204ENST00000524843 TRBV5-3A0A0A0MS03 114 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 FOXE1O00358 373 aaPredicted RBP7.23□□□□□ -1.25
CASP4-204ENST00000524843 INPP4BO15327 924 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 AKAP10O43572 662 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 PI15O43692 258 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 KDM1AO60341 852 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 RNASEH2AO75792 299 aaKnown RBP7.23□□□□□ -1.25
CASP4-204ENST00000524843 SMNDC1O75940 238 aaKnown RBP eCLIP7.23□□□□□ -1.25
CASP4-204ENST00000524843 SCELO95171 688 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 ANXA6P08133 673 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 ERGP11308 486 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 BCKDHAP12694 445 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 CDH1P12830 882 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 AMD1P17707 334 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 IL1RNP18510 177 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 SDC1P18827 310 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 GGT1P19440 569 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 ITPKAP23677 461 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 S100A3P33764 101 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 HPCAL1P37235 193 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 KIR3DL1P43629 444 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 GSTM5P46439 218 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 PREPP48147 710 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 TBPL1P62380 186 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 CTBSQ01459 385 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 HMGCS1Q01581 520 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 CYP4F3Q08477 520 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 ACSM2AQ08AH3 577 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 DMPKQ09013 629 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 CNTN1Q12860 1018 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 NAE1Q13564 534 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 CAPRIN1Q14444 709 aaKnown RBP7.23□□□□□ -1.25
CASP4-204ENST00000524843 HIST2H2ACQ16777 129 aaPredicted RBP7.23□□□□□ -1.25
CASP4-204ENST00000524843 FAM174BQ3ZCQ3 159 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 XKR6Q5GH73 641 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 SPANXN4Q5MJ08 99 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 TBCELQ5QJ74 424 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 TMTC4Q5T4D3 741 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 EGFLAMQ63HQ2 1017 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 LPCAT4Q643R3 524 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 ACSM2BQ68CK6 577 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 HIST2H2AA3Q6FI13 130 aa7.23□□□□□ -1.25
CASP4-204ENST00000524843 NANOGP8Q6NSW7 305 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms