RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 CYP4F3Q08477 520 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 HYAL1Q12794 435 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 PTGR1Q14914 329 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 RFTN2Q52LD8 501 aaPredicted RBP10.46□□□□□ -0.73
SPIDR-222ENST00000524006 RABL3Q5HYI8 236 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 CAPRIN2Q6IMN6 1127 aaKnown RBP10.46□□□□□ -0.73
SPIDR-222ENST00000524006 SDE2Q6IQ49 451 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 ANKRD54Q6NXT1 300 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 VITQ6UXI7 678 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 EP400NLQ6ZTU2 488 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 CACUL1Q86Y37 369 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 SPPL2CQ8IUH8 684 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 CFAP206Q8IYR0 622 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 CHPFQ8IZ52 775 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 GALNT4Q8N4A0 578 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 CLHC1Q8NHS4 586 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 SNX19Q92543 992 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 POP5Q969H6 163 aaKnown RBP10.46□□□□□ -0.73
SPIDR-222ENST00000524006 FAM162AQ96A26 154 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 SDCCAG3Q96C92 435 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 APOLD1Q96LR9 279 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 RIPOR3Q96MK2 946 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 CGREF1Q99674 301 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 FAM83CQ9BQN1 747 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 CENPKQ9BS16 269 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 C9orf16Q9BUW7 83 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 THUMPD3Q9BV44 507 aaKnown RBP10.46□□□□□ -0.73
SPIDR-222ENST00000524006 C1QTNF7Q9BXJ2 289 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 HDAC8Q9BY41 377 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 SGK2Q9HBY8 427 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 HPS4Q9NQG7 708 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 GPRC5BQ9NZH0 403 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 RUVBL1Q9Y265 456 aaKnown RBP10.46□□□□□ -0.73
SPIDR-222ENST00000524006 PCDHGA11Q9Y5H2 935 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 PCDHA9Q9Y5H5 950 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 KCNE2Q9Y6J6 123 aa10.46□□□□□ -0.73
SPIDR-222ENST00000524006 CFAP54Q96N23 3096 aa10.46□□□□□ -0.74
SPIDR-222ENST00000524006 SLC5A10A0PJK1 596 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 PLK4O00444 970 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 PRMT3O60678 531 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 ERN1O75460 977 aaKnown RBP10.45□□□□□ -0.74
SPIDR-222ENST00000524006 TIPRLO75663 272 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 PGRP06401 933 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 ANXA6P08133 673 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 BCKDHAP12694 445 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 ACPPP15309 386 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 PRPH2P23942 346 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 HTR1EP28566 365 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 GJA4P35212 333 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 IL12RB1P42701 662 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 ASMTP46597 345 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 POLE2P56282 527 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 PLIN5Q00G26 463 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 FOLH1Q04609 750 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 DPTQ07507 201 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 CNTN1Q12860 1018 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 LAPTM5Q13571 262 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 PDK3Q15120 406 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 TLR1Q15399 786 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 FAM98BQ52LJ0 330 aaKnown RBP10.45□□□□□ -0.74
SPIDR-222ENST00000524006 PAGE3Q5JUK9 113 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 C10orf62Q5T681 223 aaPredicted RBP10.45□□□□□ -0.74
SPIDR-222ENST00000524006 ZNF776Q68DI1 518 aaPredicted RBP10.45□□□□□ -0.74
SPIDR-222ENST00000524006 TANGO2Q6ICL3 276 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 NANOGP8Q6NSW7 305 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 MED27Q6P2C8 311 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 UNC5DQ6UXZ4 953 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 MSANTD1Q6ZTZ1 278 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 MTSS1LQ765P7 747 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 ERMP1Q7Z2K6 904 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 TMPRSS11BQ86T26 416 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 LRRTM4Q86VH4 590 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 ADHFE1Q8IWW8 467 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 OR2T12Q8NG77 320 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 LRTOMTQ8WZ04 291 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 UBE2E3Q969T4 207 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 VOPP1Q96AW1 172 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 ERLEC1Q96DZ1 483 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 FAM120BQ96EK7 910 aaKnown RBP10.45□□□□□ -0.74
SPIDR-222ENST00000524006 DUS3LQ96G46 650 aaKnown RBP10.45□□□□□ -0.74
SPIDR-222ENST00000524006 SLC45A3Q96JT2 553 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 TEX37Q96LM6 180 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 TSSK3Q96PN8 268 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 PRPF18Q99633 342 aaKnown RBP10.45□□□□□ -0.74
SPIDR-222ENST00000524006 EFCAB11Q9BUY7 163 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 SEMA6AQ9H2E6 1030 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 TMEM245Q9H330 911 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 CLMPQ9H6B4 373 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 NANOGQ9H9S0 305 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 TRIM39Q9HCM9 518 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 CCDC177Q9NQR7 707 aaPredicted RBP10.45□□□□□ -0.74
SPIDR-222ENST00000524006 INTS7Q9NVH2 962 aaKnown RBP10.45□□□□□ -0.74
SPIDR-222ENST00000524006 ARMC1Q9NVT9 282 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 THAP10Q9P2Z0 257 aaPredicted RBP10.45□□□□□ -0.74
SPIDR-222ENST00000524006 CNOT11Q9UKZ1 510 aaKnown RBP10.45□□□□□ -0.74
SPIDR-222ENST00000524006 PCDHB3Q9Y5E6 796 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 ST14Q9Y5Y6 855 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 AP4B1Q9Y6B7 739 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 STON1Q9Y6Q2 735 aa10.45□□□□□ -0.74
SPIDR-222ENST00000524006 ZNF318Q5VUA4 2279 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms