RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 KDM1AO60341 852 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 CPNE6O95741 557 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 DHRS4L1P0CG22 281 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 TYRP1P17643 537 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 AMD1P17707 334 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 NR1D1P20393 614 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 SHMT2P34897 504 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 HSD17B2P37059 387 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 GPR3P46089 330 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 AGTR2P50052 363 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 ALDH18A1P54886 795 aaKnown RBP11.53□□□□□ -0.56
PVT1-215ENST00000522963 WDR4P57081 412 aaKnown RBP11.53□□□□□ -0.56
PVT1-215ENST00000522963 GABREP78334 506 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 NFKB2Q00653 900 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 TAP2Q03519 686 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 NAE1Q13564 534 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 NR1D2Q14995 579 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 ARHGAP19Q14CB8 494 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 PCLAFQ15004 111 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 SETDB1Q15047 1291 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 ANKS6Q68DC2 871 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 TMPRSS9Q7Z410 1059 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 AMIGO1Q86WK6 493 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 SYTL1Q8IYJ3 562 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 ADGRF3Q8IZF5 1079 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 RAB42Q8N4Z0 105 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 OR2L8Q8NGY9 312 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 ATL1Q8WXF7 558 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 NCSTNQ92542 709 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 ESAMQ96AP7 390 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 NXPE2Q96DL1 559 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 TMEM74Q96NL1 305 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 MECRQ9BV79 373 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 RAB11FIP5Q9BXF6 653 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 TMEM121BQ9BXQ6 578 aaPredicted RBP11.53□□□□□ -0.56
PVT1-215ENST00000522963 STRADBQ9C0K7 418 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 ATG10Q9H0Y0 220 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 SEMA6CQ9H3T2 930 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 SRMSQ9H3Y6 488 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 NKIRAS1Q9NYS0 192 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 WWOXQ9NZC7 414 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 OGFRQ9NZT2 677 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 KLHL3Q9UH77 587 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 LNPEPQ9UIQ6 1025 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 MID2Q9UJV3 735 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 TMCO1Q9UM00 188 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 SATB2Q9UPW6 733 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 ASB1Q9Y576 335 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 IGF2RP11717 2491 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 ACACAQ13085 2346 aa11.53□□□□□ -0.56
PVT1-215ENST00000522963 COL27A1Q8IZC6 1860 aaPredicted RBP11.53□□□□□ -0.56
PVT1-215ENST00000522963 A0A1W2PPV9 198 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 OR6C74A6NCV1 312 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 A8MU76 341 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 STX16-NPEPL1H3BU86 382 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 BTN3A3O00478 584 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 STX16O14662 325 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 DUX1O43812 170 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 IPO13O94829 963 aaKnown RBP11.52□□□□□ -0.57
PVT1-215ENST00000522963 SIX3O95343 332 aaPredicted RBP11.52□□□□□ -0.57
PVT1-215ENST00000522963 PROS1P07225 676 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 BPGMP07738 259 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 HOXB3P14651 431 aaPredicted RBP11.52□□□□□ -0.57
PVT1-215ENST00000522963 CD1CP29017 333 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 PEBP1P30086 187 aaKnown RBP11.52□□□□□ -0.57
PVT1-215ENST00000522963 ALDH3A1P30838 453 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 GGT5P36269 586 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 GDF5P43026 501 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 SLC6A12P48065 614 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 SERPINB4P48594 390 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 HSPA7P48741 367 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 HNMTP50135 292 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 PDX1P52945 283 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 PRKAA2P54646 552 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 ST3GAL2Q16842 350 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 PTCHD3Q3KNS1 767 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 SUSD1Q6UWL2 747 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 TAX1BP1Q86VP1 789 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 SLC22A9Q8IVM8 553 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 C10orf107Q8IVU9 208 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 KLHDC8AQ8IYD2 350 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 CACTIN-AS1Q8N1I8 211 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 TCAIMQ8N3R3 496 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 RCBTB1Q8NDN9 531 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 OR56A3Q8NH54 315 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 HMGCLL1Q8TB92 370 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 UBTD2Q8WUN7 234 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 SMPDL3AQ92484 453 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 RSC1A1Q92681 617 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 PYCR2Q96C36 320 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 TWSG1Q9GZX9 223 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 ACSS2Q9NR19 701 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 OXSMQ9NWU1 459 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 SPHK1Q9NYA1 384 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 OR6C2Q9NZP2 312 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 TMEM9Q9P0T7 183 aa11.52□□□□□ -0.57
PVT1-215ENST00000522963 URB1O60287 2271 aaKnown RBP11.51□□□□□ -0.57
PVT1-215ENST00000522963 APC2O95996 2303 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 CCDC187A0A096LP49 1063 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 WDR91A4D1P6 747 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms