RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 RHBDF1Q96CC6 855 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC41A3Q96GZ6 507 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 KAZALD1Q96I82 304 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 SENP8Q96LD8 212 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 BTBD9Q96Q07 612 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 C16orf70Q9BSU1 422 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 ALG12Q9BV10 488 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 TMEM39BQ9GZU3 492 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 IQCGQ9H095 443 aaKnown RBP3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 CATSPERBQ9H7T0 1116 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 MED20Q9H944 212 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 WDR76Q9H967 626 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 HHATLQ9HCP6 504 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 AGPAT3Q9NRZ7 376 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 ACSS1Q9NUB1 689 aaPredicted RBP3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 RDH8Q9NYR8 311 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 SEMA5BQ9P283 1151 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 STK39Q9UEW8 545 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 PLEKHB1Q9UF11 243 aaPredicted RBP3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 CNOT6Q9ULM6 557 aaKnown RBP3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 ABT1Q9ULW3 272 aaKnown RBP3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 PCDHA7Q9UN72 937 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 MRPS33Q9Y291 106 aaKnown RBP3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 B3GALT5Q9Y2C3 310 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 MAP3K2Q9Y2U5 619 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC30A1Q9Y6M5 507 aa3.8□□□□□ -1.8
RNU4-60P-201ENST00000517239 MAST3O60307 1309 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 SF3B1O75533 1304 aaKnown RBP eCLIP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 MAP3K19Q56UN5 1328 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 A0A096LPK6 155 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 LOC100653049A0A140TA62 436 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 A0A1B0GTQ1 180 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 TMEM129A0AVI4 362 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 TMEM89A2RUT3 159 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 ARHGEF35A5YM69 484 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 TMEM221A6NGB7 291 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC15A5A6NIM6 579 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 OR52A4PA6NMU1 304 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 EIF4E1BA6NMX2 242 aaKnown RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 BECN2A8MW95 431 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 TMEM189-UBE2V1I3L0A0 370 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 J3QR06 171 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 PLSCR1O15162 318 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 B4GALT4O60513 344 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 RPS6KA4O75676 772 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 KRT34O76011 436 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 TMCC1O94876 653 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 OR4F21O95013 312 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 GSRP00390 522 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 PRNPP04156 253 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 CHRNGP07510 517 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 PABPC4LP0CB38 370 aaKnown RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 SAGP10523 405 aaPredicted RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 FBLP22087 321 aaKnown RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 PRKACBP22694 351 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 CDC25AP30304 524 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 USP8P40818 1118 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 RAP1GAPP47736 663 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 OR3A1P47881 315 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC1A6P48664 564 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC9A3P48764 834 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 ALDH7A1P49419 539 aaKnown RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 RGS4P49798 205 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 ENTPD1P49961 510 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 SSTP61278 116 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 ABATP80404 500 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 LIPEQ05469 1076 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 ITIH3Q06033 890 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 UBE2V1Q13404 147 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 GRM7Q14831 915 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 NR1D2Q14995 579 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 ACKR1Q16570 336 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 CMPK2Q5EBM0 449 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 FSCBQ5H9T9 825 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 SPDYCQ5MJ68 293 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 TEDDM1Q5T9Z0 273 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 ZDHHC20Q5W0Z9 365 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 CARD17Q5XLA6 110 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 C18orf63Q68DL7 685 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 PLEKHA7Q6IQ23 1121 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 LRRC55Q6ZSA7 311 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 TPRG1Q6ZUI0 275 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 SLC51AQ86UW1 340 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 LONP2Q86WA8 852 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 CROCCP3Q8IVE0 287 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 SFTPA1Q8IWL2 248 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 STHQ8IWL8 128 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 GSPT2Q8IYD1 628 aaKnown RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 GCNT2Q8N0V5 402 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 ARHGAP24Q8N264 748 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 TCAIMQ8N3R3 496 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 SPATA6LQ8N4H0 392 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 PAQR4Q8N4S7 273 aaPredicted RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 TXNDC5Q8NBS9 432 aaKnown RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 ZNF397Q8NF99 534 aaPredicted RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 BBS1Q8NFJ9 593 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 BPIFCQ8NFQ6 507 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 ABHD11Q8NFV4 315 aa3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 VANGL1Q8TAA9 524 aaPredicted RBP3.79□□□□□ -1.8
RNU4-60P-201ENST00000517239 RAB3IL1Q8TBN0 382 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms