RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 PABPN1LA6NDY0 278 aaKnown RBP13.43□□□□□ -0.26
USP46-209ENST00000514536 NPEPPSL1A6NEC2 478 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 TMEM150CB9EJG8 249 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 POC1B-GALNT4F8VUJ3 575 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 STK17BO94768 372 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 KIAA0754O94854 1291 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 WISP3O95389 354 aaPredicted RBP13.43□□□□□ -0.26
USP46-209ENST00000514536 TIAF1O95411 115 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 CCDC166P0CW27 439 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 GMPRP36959 345 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 GRIA3P42263 894 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 RAB10P61026 200 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 BMPR2Q13873 1038 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 FCRL6Q6DN72 434 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 CMC1Q7Z7K0 106 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 DTX1Q86Y01 620 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 LRRC56Q8IYG6 542 aaPredicted RBP13.43□□□□□ -0.26
USP46-209ENST00000514536 DNAJC22Q8N4W6 341 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 EIF1ADQ8N9N8 165 aaKnown RBP13.43□□□□□ -0.26
USP46-209ENST00000514536 OR2L3Q8NG85 312 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 SLC44A1Q8WWI5 657 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 ANKRD7Q92527 254 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 N4BP2L2Q92802 583 aaPredicted RBP13.43□□□□□ -0.26
USP46-209ENST00000514536 ZUFSPQ96AP4 578 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 DPH1Q9BZG8 443 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 ATG10Q9H0Y0 220 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 ANKZF1Q9H8Y5 726 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 INTS7Q9NVH2 962 aaKnown RBP13.43□□□□□ -0.26
USP46-209ENST00000514536 UTP6Q9NYH9 597 aaKnown RBP13.43□□□□□ -0.26
USP46-209ENST00000514536 CTNNAL1Q9UBT7 734 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 TAC3Q9UHF0 121 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 SERTAD3Q9UJW9 196 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 ZFYVE26Q68DK2 2539 aa13.43□□□□□ -0.26
USP46-209ENST00000514536 TEX51A0A1B0GUA7 166 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 HMX2A2RU54 273 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.42□□□□□ -0.26
USP46-209ENST00000514536 HCRTR1O43613 425 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 FKBP9O95302 570 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 GUCA1CO95843 209 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 CMPK1P30085 196 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 ZKSCAN8Q15776 578 aaPredicted RBP13.42□□□□□ -0.26
USP46-209ENST00000514536 DEFB110Q30KQ9 67 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 THEMIS2Q5TEJ8 643 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 PRAMEF17Q5VTA0 474 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 AGTRAPQ6RW13 159 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 SBSNQ6UWP8 590 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 RAPH1Q70E73 1250 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 TIPARPQ7Z3E1 657 aaKnown RBP13.42□□□□□ -0.26
USP46-209ENST00000514536 OR8K5Q8NH50 307 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 OR1L3Q8NH93 324 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 NKD1Q969G9 470 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 ALKBH8Q96BT7 664 aaKnown RBP13.42□□□□□ -0.26
USP46-209ENST00000514536 FCRL4Q96PJ5 515 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 TXLNGYQ9BZA5 131 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 DERL2Q9GZP9 239 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 CHRNA10Q9GZZ6 450 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 FANCEQ9HB96 536 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 ARL15Q9NXU5 204 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 PILRAQ9UKJ1 303 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 NOVA2Q9UNW9 492 aaKnown RBP13.42□□□□□ -0.26
USP46-209ENST00000514536 TMEM184BQ9Y519 407 aaPredicted RBP13.42□□□□□ -0.26
USP46-209ENST00000514536 IKBKGQ9Y6K9 419 aa13.42□□□□□ -0.26
USP46-209ENST00000514536 DSPP15924 2871 aaKnown RBP13.42□□□□□ -0.26
USP46-209ENST00000514536 TARM1B6A8C7 271 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 RIPK2O43353 540 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 RAD1O60671 282 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 NTRK1P04629 796 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 INHBAP08476 426 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 ENO2P09104 434 aaPredicted RBP13.41□□□□□ -0.26
USP46-209ENST00000514536 MSL3P1P0C860 447 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 CRABP2P29373 138 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 MSH2P43246 934 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 GABRA4P48169 554 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 AP1S2P56377 157 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 TLE3Q04726 772 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 PRDX1Q06830 199 aaKnown RBP13.41□□□□□ -0.26
USP46-209ENST00000514536 NAE1Q13564 534 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 CSHL1Q14406 222 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 TSNQ15631 228 aaKnown RBP13.41□□□□□ -0.26
USP46-209ENST00000514536 C19orf48Q6RUI8 117 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 TMEM126BQ8IUX1 230 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 NLGN4XQ8N0W4 816 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 GALNT6Q8NCL4 622 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 NLGN4YQ8NFZ3 816 aaPredicted RBP13.41□□□□□ -0.26
USP46-209ENST00000514536 MED8Q96G25 268 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 PAFAH2Q99487 392 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 DPH7Q9BTV6 452 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 SPRTNQ9H040 489 aaPredicted RBP13.41□□□□□ -0.26
USP46-209ENST00000514536 MRPS30Q9NP92 439 aaKnown RBP13.41□□□□□ -0.26
USP46-209ENST00000514536 SCRG1O75711 98 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 DLGAP3O95886 979 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 ABHD2P08910 425 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 SLC35E2BP0CK96 405 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 CD1DP15813 335 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 TNFRSF8P28908 595 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 ATP1A2P50993 1020 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 ITGA1P56199 1179 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 SRSF6Q13247 344 aaKnown RBP13.41□□□□□ -0.26
USP46-209ENST00000514536 PPP1R3AQ16821 1122 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 ZXDCQ2QGD7 858 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms