RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ARSGQ96EG1 525 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 LINC00479Q96M42 142 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 AK8Q96MA6 479 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 SFXN2Q96NB2 322 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 KATNB1Q9BVA0 655 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 FNDC11Q9BVV2 318 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 THAP9Q9H5L6 903 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 TRPC7Q9HCX4 862 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 RPS10P5Q9NQ39 176 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 EQTNQ9NQ60 294 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 INTS10Q9NVR2 710 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 TBC1D7Q9P0N9 293 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 CACNG4Q9UBN1 327 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 ITGA11Q9UKX5 1188 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 WBP11Q9Y2W2 641 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 IGSF1Q8N6C5 1336 aa3.85□□□□□ -1.79
TRAPPC13-209ENST00000508304 A0A0G2JNG1 304 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 A0A1W2PP11 408 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 A0A1W2PRV1 198 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 SYCE3A1L190 88 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 TMEM8BA6NDV4 472 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 OOEPA6NGQ2 149 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 TMEM189-UBE2V1I3L0A0 370 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 SLC33A1O00400 549 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 PLPP2O43688 288 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 B3GALNT1O75752 331 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 BMP10O95393 424 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 RLN1P04808 185 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 TFAP2AP05549 437 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 HMOX1P09601 288 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 PRSS56P0CW18 603 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 GNAZP19086 355 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 CDC25CP30307 473 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 CD81P60033 236 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 STX1BP61266 288 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 ARF5P84085 180 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 RUNX1T1Q06455 604 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 ACTN3Q08043 901 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 WASHC5Q12768 1159 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 RPA4Q13156 261 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 UBE2V1Q13404 147 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 KIR2DS5Q14953 304 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 MEP1BQ16820 701 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 DUOXA1Q1HG43 343 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 VWC2Q2TAL6 325 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 TWISTNBQ3B726 338 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 ZRANB3Q5FWF4 1079 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 TCTE1Q5JU00 501 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 ALS2CLQ60I27 953 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 NSUN5P2Q63ZY6 315 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 FAM91A1Q658Y4 838 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 RAB12Q6IQ22 244 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 LCN10Q6JVE6 187 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 RBMS3Q6XE24 437 aaKnown RBP3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 TRPT1Q86TN4 253 aaKnown RBP3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 ADIPOR2Q86V24 386 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 TIGD4Q8IY51 512 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 CLYBLQ8N0X4 340 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 RASGEF1CQ8N431 466 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 GCSAMQ8N6F7 178 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 FAM222BQ8WU58 562 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 ATL1Q8WXF7 558 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 CORO2AQ92828 525 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 BSCL2Q96G97 398 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 ART5Q96L15 291 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 PARK7Q99497 189 aaKnown RBP3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 OPRPNQ99935 248 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 INPP5KQ9BT40 448 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 MLPHQ9BV36 600 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 TRIM15Q9C019 465 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 TBC1D17Q9HA65 648 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 MID1IP1Q9NPA3 183 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 SLC52A3Q9NQ40 469 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 ECHDC1Q9NTX5 307 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 SLC38A7Q9NVC3 462 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 ERAP1Q9NZ08 941 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 MTUS1Q9ULD2 1270 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 LIPT1Q9Y234 373 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 ITM2BQ9Y287 266 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 YIPF1Q9Y548 306 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 PRAG1Q86YV5 1406 aa3.84□□□□□ -1.79
TRAPPC13-209ENST00000508304 A0A0J9YWU9 116 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 J3QR06 171 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 XRCC3O43542 346 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 ZNF821O75541 412 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 ZFYP08048 801 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 FAM58BPP0C7Q3 252 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 ERVK-10P10266 1014 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 MYL6BP14649 208 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 ZNF26P17031 533 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 AZGP1P25311 298 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 PSMA3P25788 255 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 CTNNB1P35222 781 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 NT5C2P49902 561 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 SNU13P55769 128 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 CDK3Q00526 305 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 MBTD1Q05BQ5 628 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 NR1D2Q14995 579 aa3.83□□□□□ -1.8
TRAPPC13-209ENST00000508304 TYSND1Q2T9J0 566 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms