RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 CASRP41180 1078 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 RAB28P51157 221 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 ITGA1P56199 1179 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 SESN2P58004 480 aaPredicted RBP7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 BASP1P80723 227 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 SARNPP82979 210 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 HSPA14Q0VDF9 509 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 GRB7Q14451 532 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 KCNJ11Q14654 390 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 BRD3Q15059 726 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 ZIC1Q15915 447 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 KYNUQ16719 465 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 SLC5A12Q1EHB4 618 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 SYTL3Q4VX76 610 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 FAM199XQ6PEV8 388 aaPredicted RBP7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 CDHR3Q6ZTQ4 885 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 VRK3Q8IV63 474 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 DNAJC22Q8N4W6 341 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 C19orf47Q8N9M1 422 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 MCUQ8NE86 351 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 ADAMTS17Q8TE56 1095 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 MR1Q95460 341 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 SLC22A18Q96BI1 424 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 PBKQ96KB5 322 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 BIRC8Q96P09 236 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 PANX3Q96QZ0 392 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 MENTQ9BUN1 341 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 CHST8Q9H2A9 424 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 ACTR5Q9H9F9 607 aaPredicted RBP7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 FAM60AQ9NP50 221 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 MLXIPLQ9NP71 852 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 PCMTD2Q9NV79 361 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 SPHK1Q9NYA1 384 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 SOX13Q9UN79 622 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 NEU2Q9Y3R4 380 aa7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 DIDO1Q9BTC0 2240 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-222ENST00000508238 SHANK1Q9Y566 2161 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 A0A096LPE4 126 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 A0A0J9YY10 115 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 LOC100996750A0A140TA64 210 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 TMEM238LA0A1B0GVL6 79 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 A0A1W2PPZ6 126 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 TCRBV7S3A2A0A539 114 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 IQCF5A8MTL0 148 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 E7EQ34 232 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 H3BMM5 538 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 MKRN2OSH3BPM6 223 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 ZNF749O43361 778 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 PRICKLE3O43900 615 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 NDUFS3O75489 264 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 RFPL1O75677 317 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 VAPBO95292 243 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 FKBP9O95302 570 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 ONECUT2O95948 504 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 CYP2A7P20853 494 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 CD9P21926 228 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 MGAT1P26572 445 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 ATP5DP30049 168 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 PKLRP30613 574 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 SNRPNP63162 240 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 CRADDP78560 199 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 NFKB2Q00653 900 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 TMED2Q15363 201 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 CYP1B1Q16678 543 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 TYSND1Q2T9J0 566 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 LACTB2Q53H82 288 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 RNF187Q5TA31 235 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 PRAMEF17Q5VTA0 474 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 PAPD7Q5XG87 772 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 PTRHD1Q6GMV3 140 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 KIAA0930Q6ICG6 404 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 LCN10Q6JVE6 187 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 MRNIPQ6NTE8 343 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 TLDC1Q6P9B6 456 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 NAPRTQ6XQN6 538 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 SDCCAG8Q86SQ7 713 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 LDB1Q86U70 411 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 TMEM135Q86UB9 458 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 HOOK3Q86VS8 718 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 DCUN1D3Q8IWE4 304 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 SYTL1Q8IYJ3 562 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 GPR135Q8IZ08 494 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 LINC01555Q8NAE3 123 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 OR2L8Q8NGY9 312 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 HMGCLL1Q8TB92 370 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 LKAAEAR1Q8TD35 194 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 LPGAT1Q92604 370 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 CLIP3Q96DZ5 547 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 MRRFQ96E11 262 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 RNF31Q96EP0 1072 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 MFSD3Q96ES6 412 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 RUFY1Q96T51 708 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 NAP1L3Q99457 506 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 C17orf62Q9BQA9 187 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 DHRS4Q9BTZ2 278 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 KRTAP4-6Q9BYQ5 205 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 ADAM19Q9H013 955 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 CLMPQ9H6B4 373 aa7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 ZNF71Q9NQZ8 489 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-222ENST00000508238 VTI1BQ9UEU0 232 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms