RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 F8A1P23610 371 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 PSMB5P28074 263 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 GABRA4P48169 554 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 CYP4F2P78329 520 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 MC1RQ01726 317 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 GPS2Q13227 327 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 GLE1Q53GS7 698 aaKnown RBP12.31□□□□□ -0.44
HSPG2-213ENST00000498495 FCRL6Q6DN72 434 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 C16orf46Q6P387 395 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 TLDC1Q6P9B6 456 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 ZC3HC1Q86WB0 502 aaKnown RBP12.31□□□□□ -0.44
HSPG2-213ENST00000498495 MCATQ8IVS2 390 aaKnown RBP12.31□□□□□ -0.44
HSPG2-213ENST00000498495 CTAGE3PQ8IX95 158 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 CEP112Q8N8E3 955 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 SLC38A9Q8NBW4 561 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 PPFIBP2Q8ND30 876 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 OR2L3Q8NG85 312 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 ZNF480Q8WV37 535 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 VPS39Q96JC1 886 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 CCDC138Q96M89 665 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 LRFN5Q96NI6 719 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 OLFM1Q99784 485 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 ACAT2Q9BWD1 397 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 TRIM54Q9BYV2 358 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 RHOJQ9H4E5 214 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 PARVBQ9HBI1 364 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 MRPS30Q9NP92 439 aaKnown RBP12.31□□□□□ -0.44
HSPG2-213ENST00000498495 SMYD2Q9NRG4 433 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 ABCF3Q9NUQ8 709 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 EURLQ9NYK6 297 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 ADAMTS6Q9UKP5 1117 aa12.31□□□□□ -0.44
HSPG2-213ENST00000498495 ANKRD11Q6UB99 2663 aaPredicted RBP12.3□□□□□ -0.44
HSPG2-213ENST00000498495 EIF4E1BA6NMX2 242 aaKnown RBP12.3□□□□□ -0.44
HSPG2-213ENST00000498495 CXorf49A8MYA2 514 aaPredicted RBP12.3□□□□□ -0.44
HSPG2-213ENST00000498495 E7ENX8 843 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 AGXTP21549 392 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 PGGT1BP53609 377 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 SLC12A2P55011 1212 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 GPX6P59796 221 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 RPS15P62841 145 aaKnown RBP12.3□□□□□ -0.44
HSPG2-213ENST00000498495 TAP2Q03519 686 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 PRDX1Q06830 199 aaKnown RBP12.3□□□□□ -0.44
HSPG2-213ENST00000498495 SP140Q13342 867 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 DNASE1L3Q13609 305 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 NAA25Q14CX7 972 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 THEMIS2Q5TEJ8 643 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 CEP128Q6ZU80 1094 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 DSELQ8IZU8 1212 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 ZNF655Q8N720 491 aaPredicted RBP12.3□□□□□ -0.44
HSPG2-213ENST00000498495 NOA1Q8NC60 698 aaKnown RBP12.3□□□□□ -0.44
HSPG2-213ENST00000498495 LSM14AQ8ND56 463 aaKnown RBP12.3□□□□□ -0.44
HSPG2-213ENST00000498495 CT55Q8WUE5 264 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 IFT81Q8WYA0 676 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 STARD8Q92502 1023 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 SEC14L1Q92503 715 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 DLG3Q92796 817 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 CPNE1Q99829 537 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 ARHGAP9Q9BRR9 750 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 GPR87Q9BY21 358 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 LRRC4CQ9HCJ2 640 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 UTP6Q9NYH9 597 aaKnown RBP12.3□□□□□ -0.44
HSPG2-213ENST00000498495 MTRF1LQ9UGC7 380 aaKnown RBP12.3□□□□□ -0.44
HSPG2-213ENST00000498495 TAC3Q9UHF0 121 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 DMGDHQ9UI17 866 aaKnown RBP12.3□□□□□ -0.44
HSPG2-213ENST00000498495 PDE10AQ9Y233 779 aa12.3□□□□□ -0.44
HSPG2-213ENST00000498495 MRPS18BQ9Y676 258 aaKnown RBP12.3□□□□□ -0.44
HSPG2-213ENST00000498495 LAMA5O15230 3695 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 AHCTF1Q8WYP5 2266 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 A0A0J9YVX5 310 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 FAM159BA6NKW6 160 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 C21orf140B9A014 251 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 ATXN7O15265 892 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-213ENST00000498495 ZSCAN9O15535 394 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-213ENST00000498495 SRPX2O60687 465 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-213ENST00000498495 CCNDBP1O95273 360 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 ITGB2P05107 769 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 IMPA1P29218 277 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 TAS2R39P59534 338 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 YBX1P67809 324 aaKnown RBP12.29□□□□□ -0.44
HSPG2-213ENST00000498495 ABATP80404 500 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 SOWAHCQ53LP3 525 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-213ENST00000498495 TCTE1Q5JU00 501 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 ICE2Q659A1 982 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 NKAPQ8N5F7 415 aaKnown RBP12.29□□□□□ -0.44
HSPG2-213ENST00000498495 FBF1Q8TES7 1133 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 TTC9Q92623 222 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 WBP1Q96G27 269 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 PDLIM5Q96HC4 596 aaKnown RBP12.29□□□□□ -0.44
HSPG2-213ENST00000498495 CATSPER2Q96P56 530 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 DPH2Q9BQC3 489 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-213ENST00000498495 DPH7Q9BTV6 452 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 NDC1Q9BTX1 674 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 CHST8Q9H2A9 424 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 ZDHHC18Q9NUE0 388 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 TXLNGQ9NUQ3 528 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 PCMTD2Q9NV79 361 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 FARSAQ9Y285 508 aaKnown RBP12.29□□□□□ -0.44
HSPG2-213ENST00000498495 MTO1Q9Y2Z2 717 aaKnown RBP12.29□□□□□ -0.44
HSPG2-213ENST00000498495 PCDHGA6Q9Y5G7 932 aa12.29□□□□□ -0.44
HSPG2-213ENST00000498495 KLK4Q9Y5K2 254 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms