RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CCDC138Q96M89 665 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 VPS35Q96QK1 796 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 MAGIXQ9H6Y5 334 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 SERHLQ9NQF3 203 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 DCAF13Q9NV06 445 aaKnown RBP10.76□□□□□ -0.69
CMSS1-208ENST00000496116 DKK3Q9UBP4 350 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 PCDHGA11Q9Y5H2 935 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 WNT6Q9Y6F9 365 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 FADS2P1A8MWK0 482 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 EVPLLA8MZ36 301 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 RFXANKO14593 260 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 WNT9AO14904 365 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 SGTAO43765 313 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 PRMT3O60678 531 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 PSIP1O75475 530 aaKnown RBP10.76□□□□□ -0.69
CMSS1-208ENST00000496116 CREG1O75629 220 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 RECQL5O94762 991 aaPredicted RBP10.76□□□□□ -0.69
CMSS1-208ENST00000496116 CATP04040 527 aaKnown RBP10.76□□□□□ -0.69
CMSS1-208ENST00000496116 ALPLP05186 524 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 SRPRAP08240 638 aaKnown RBP10.76□□□□□ -0.69
CMSS1-208ENST00000496116 ELFN1P0C7U0 828 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 THRBP10828 461 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 TCF3P15923 654 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 IL1RNP18510 177 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 KIR3DL1P43629 444 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 PHC1P78364 1004 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 SRSF11Q05519 484 aaKnown RBP10.76□□□□□ -0.69
CMSS1-208ENST00000496116 MYBPC3Q14896 1274 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 GTDC1Q4AE62 458 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 XKR6Q5GH73 641 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 NOXRED1Q6NXP6 359 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 TBPL2Q6SJ96 375 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 CALHM3Q86XJ0 350 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 ADHFE1Q8IWW8 467 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 PNPT1Q8TCS8 783 aaKnown RBP10.76□□□□□ -0.69
CMSS1-208ENST00000496116 SORCS1Q8WY21 1168 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 GLMNQ92990 594 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 REXO5Q96IC2 774 aaKnown RBP10.76□□□□□ -0.69
CMSS1-208ENST00000496116 HIC2Q96JB3 615 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 FOPNLQ96NB1 174 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 FAM83CQ9BQN1 747 aa10.76□□□□□ -0.69
CMSS1-208ENST00000496116 CPPED1Q9BRF8 314 aaPredicted RBP10.76□□□□□ -0.69
CMSS1-208ENST00000496116 TRMUO75648 421 aaKnown RBP10.75□□□□□ -0.69
CMSS1-208ENST00000496116 FGBP02675 491 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 ASLP04424 464 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 CTSLP07711 333 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 SYN1P17600 705 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 TACR1P25103 407 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 TTKP33981 857 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 CTNNB1P35222 781 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 HNF4AP41235 474 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 GJA8P48165 433 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 PRLHRP49683 370 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 ST8SIA6P61647 398 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 ABRQ12979 859 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 PON2Q15165 354 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 SLC44A4Q53GD3 710 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 CCNYL2Q5T2Q4 361 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 TECPR1Q7Z6L1 1165 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 THOC6Q86W42 341 aaKnown RBP10.75□□□□□ -0.69
CMSS1-208ENST00000496116 ANKRD46Q86W74 232 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 SYT12Q8IV01 421 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 RASGRP3Q8IV61 690 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 POF1BQ8WVV4 589 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 MYLIPQ8WY64 445 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 STARD8Q92502 1023 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 NELL1Q92832 810 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 GLYATL1Q969I3 302 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 TMIGD2Q96BF3 282 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 AURKBQ96GD4 344 aaPredicted RBP10.75□□□□□ -0.69
CMSS1-208ENST00000496116 METTL2AQ96IZ6 378 aaKnown RBP10.75□□□□□ -0.69
CMSS1-208ENST00000496116 VPS29Q9UBQ0 182 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 FAM8A1Q9UBU6 413 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 ARHGEF33A8MVX0 844 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 PSMD11O00231 422 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 ZNF197O14709 1029 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 TSPAN6O43657 245 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 PRKD3O94806 890 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 MYO1DO94832 1006 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 LRATO95237 230 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 HNRNPA1P09651 372 aaKnown RBP eCLIP10.75□□□□□ -0.69
CMSS1-208ENST00000496116 HSD3B1P14060 373 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 HSD3B2P26439 372 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 RPL10P27635 214 aaKnown RBP10.75□□□□□ -0.69
CMSS1-208ENST00000496116 WEE1P30291 646 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 BMPR1AP36894 532 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 TRPC1P48995 793 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 DGKGP49619 791 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 TMEM115Q12893 351 aaPredicted RBP10.75□□□□□ -0.69
CMSS1-208ENST00000496116 ACOX1Q15067 660 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 ZBED5Q49AG3 693 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 TTC23Q5W5X9 447 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 AGTRAPQ6RW13 159 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 NRSN1Q8IZ57 195 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 EID3Q8N140 333 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 FAM86B1Q8N7N1 296 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 WDR20Q8TBZ3 569 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 WFIKKN2Q8TEU8 576 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 AP2M1Q96CW1 435 aa10.75□□□□□ -0.69
CMSS1-208ENST00000496116 MED8Q96G25 268 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms