RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 MTCP1P56278 107 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 GSDMDP57764 484 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 B3GALT5-AS1P59052 145 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 DLK1P80370 383 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 ILF2Q12905 390 aaKnown RBP3.61□□□□□ -1.83
CLK1-213ENST00000492793 BFSP1Q12934 665 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 NPTX1Q15818 432 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 ALDH1L2Q3SY69 923 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 KLHL22Q53GT1 634 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 LACTB2Q53H82 288 aaPredicted RBP3.61□□□□□ -1.83
CLK1-213ENST00000492793 C20orf194Q5TEA3 1177 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 SHEQ5VZ18 495 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 FAM91A1Q658Y4 838 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 SLC16A9Q7RTY1 509 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 SPATA19Q7Z5L4 167 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 ABI3BPQ7Z7G0 1075 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.61□□□□□ -1.83
CLK1-213ENST00000492793 HEXDCQ8WVB3 486 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 SUSD6Q92537 303 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 FAM162AQ96A26 154 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 CENPTQ96BT3 561 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 FBXO17Q96EF6 278 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 PGM2Q96G03 612 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 BSCL2Q96G97 398 aaPredicted RBP3.61□□□□□ -1.83
CLK1-213ENST00000492793 SENP5Q96HI0 755 aaPredicted RBP3.61□□□□□ -1.83
CLK1-213ENST00000492793 SPATA33Q96N06 139 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 JAKMIP1Q96N16 626 aaKnown RBP3.61□□□□□ -1.83
CLK1-213ENST00000492793 LRRC3BQ96PB8 259 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 FNBP1Q96RU3 617 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 CCDC3Q9BQI4 270 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 SIX2Q9NPC8 291 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 CHST11Q9NPF2 352 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 GSN-AS1Q9NRJ2 163 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 ZNF701Q9NV72 531 aaPredicted RBP3.61□□□□□ -1.83
CLK1-213ENST00000492793 ZNF624Q9P2J8 865 aaPredicted RBP3.61□□□□□ -1.83
CLK1-213ENST00000492793 GMEB2Q9UKD1 530 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 CHKBQ9Y259 395 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 R4GN57 208 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 CNTNAP2Q9UHC6 1331 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 KIAA1210Q9ULL0 1709 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 BLOC1S5-TXNDC5H3BN57 136 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 CCDC188H7C350 402 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 EPHB6O15197 1021 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 PCDH7O60245 1069 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 DDHD2O94830 711 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 HMBSP08397 361 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 FAM58BPP0C7Q3 252 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 TCF4P15884 667 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 ITGA3P26006 1051 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 WNT5AP41221 380 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 MAZP56270 477 aaKnown RBP3.6□□□□□ -1.83
CLK1-213ENST00000492793 GCNT1Q02742 428 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 SCARB2Q14108 478 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 UGCGQ16739 394 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 CTU2Q2VPK5 515 aaKnown RBP3.6□□□□□ -1.83
CLK1-213ENST00000492793 KIAA1644Q3SXP7 199 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 SLC35D3Q5M8T2 416 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 FFAR4Q5NUL3 377 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 LCN1P1Q5VSP4 162 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 OR4A47Q6IF82 309 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 ZNF449Q6P9G9 518 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 CTR9Q6PD62 1173 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 MARK2Q7KZI7 788 aaKnown RBP3.6□□□□□ -1.83
CLK1-213ENST00000492793 NRARPQ7Z6K4 114 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 ANKRD23Q86SG2 305 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 CUZD1Q86UP6 607 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 AMIGO1Q86WK6 493 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 CROCCP3Q8IVE0 287 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 BMPERQ8N8U9 685 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 RASGEF1AQ8N9B8 481 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 CCDC63Q8NA47 563 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 OR10Q1Q8NGQ4 319 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 OR52N5Q8NH56 324 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 TSACCQ96A04 125 aaPredicted RBP3.6□□□□□ -1.83
CLK1-213ENST00000492793 ZNF524Q96C55 264 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 INPP5KQ9BT40 448 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 FAM49AQ9H0Q0 323 aaPredicted RBP3.6□□□□□ -1.83
CLK1-213ENST00000492793 TRPV4Q9HBA0 871 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 INTS9Q9NV88 658 aaKnown RBP3.6□□□□□ -1.83
CLK1-213ENST00000492793 FLRT3Q9NZU0 649 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 C19orf25Q9UFG5 118 aaPredicted RBP3.6□□□□□ -1.83
CLK1-213ENST00000492793 TCF19Q9Y242 345 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 KCNK7Q9Y2U2 307 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 TRIM17Q9Y577 477 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 MYH15Q9Y2K3 1946 aa3.6□□□□□ -1.83
CLK1-213ENST00000492793 A0A1W2PPK0 400 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 SLC22A2O15244 555 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 FRMD6-AS1P0C7T7 363 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 IGHV4-31P0DP07 118 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 SPP1P10451 314 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 ITGB6P18564 788 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 EPORP19235 508 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 CD27P26842 260 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 CETN2P41208 172 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 RGS7P49802 495 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 VAMP7P51809 220 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 HERV-K104P61576 105 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 RASGEF1BQ0VAM2 473 aa3.59□□□□□ -1.83
CLK1-213ENST00000492793 TRAP1Q12931 704 aaKnown RBP3.59□□□□□ -1.83
CLK1-213ENST00000492793 HERC3Q15034 1050 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms