RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 NR6A1Q15406 480 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 FASTKD1Q53R41 847 aaKnown RBP8.76□□□□□ -1.01
HDAC3-212ENST00000492407 PRR30Q53SZ7 412 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-212ENST00000492407 IRAK1BP1Q5VVH5 260 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 AADACL2Q6P093 401 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 PRMT9Q6P2P2 845 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 TTLL10Q6ZVT0 673 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 CISD2Q8N5K1 135 aaKnown RBP8.76□□□□□ -1.01
HDAC3-212ENST00000492407 RNF10Q8N5U6 811 aaKnown RBP8.76□□□□□ -1.01
HDAC3-212ENST00000492407 LMNTD1Q8N9Z9 388 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 TTC29Q8NA56 475 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-212ENST00000492407 OR52K1Q8NGK4 314 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 MAGEC3Q8TD91 643 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 HDAC10Q969S8 669 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 RAD51AP1Q96B01 352 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 C19orf60Q96EN9 201 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 HES6Q96HZ4 224 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 PANX3Q96QZ0 392 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 LMF1Q96S06 567 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 NRTNQ99748 197 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 SH3GL3Q99963 347 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 LHPPQ9H008 270 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 SLC22A11Q9NSA0 550 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 CUTCQ9NTM9 273 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 IRAK4Q9NWZ3 460 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 MAP10Q9P2G4 905 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 ERRFI1Q9UJM3 462 aaPredicted RBP8.76□□□□□ -1.01
HDAC3-212ENST00000492407 ANAPC5Q9UJX4 755 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 RABL2BQ9UNT1 228 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 CDYLQ9Y232 598 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 REXO2Q9Y3B8 237 aaKnown RBP8.76□□□□□ -1.01
HDAC3-212ENST00000492407 NBPF19A0A087WUL8 3843 aa8.76□□□□□ -1.01
HDAC3-212ENST00000492407 RP1L1Q8IWN7 2480 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-212ENST00000492407 ENO4A6NNW6 628 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 SOCS6O14544 535 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 PRMT5O14744 637 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-212ENST00000492407 KRT86O43790 486 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 PRICKLE3O43900 615 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-212ENST00000492407 OR1I1O60431 355 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 NAT2P11245 290 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 EDN3P14138 238 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 CD53P19397 219 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 FDXRP22570 491 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 RPS3P23396 243 aaKnown RBP eCLIP8.75□□□□□ -1.01
HDAC3-212ENST00000492407 ITGA3P26006 1051 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 GDF10P55107 478 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 PER3P56645 1201 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 PRAMEP78395 509 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 HSPA14Q0VDF9 509 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 RAPSNQ13702 412 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 SLC9A5Q14940 896 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 BRD3Q15059 726 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 TLR1Q15399 786 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 SF1Q15637 639 aaKnown RBP8.75□□□□□ -1.01
HDAC3-212ENST00000492407 OASLQ15646 514 aaKnown RBP8.75□□□□□ -1.01
HDAC3-212ENST00000492407 NKG7Q16617 165 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 DEFB110Q30KQ9 67 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 PCID2Q5JVF3 399 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 FIGLAQ6QHK4 219 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 RAD9BQ6WBX8 426 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 PPP1R21Q6ZMI0 780 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 ZNF534Q76KX8 674 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 TICAM1Q8IUC6 712 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 LINC01555Q8NAE3 123 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 OR6P1Q8NGX9 317 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 GSDMBQ8TAX9 411 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 MPP4Q96JB8 637 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 SPSB2Q99619 263 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 EPS8L2Q9H6S3 715 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 ETNK1Q9HBU6 452 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 SLC6A20Q9NP91 592 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 EIF2B3Q9NR50 452 aaKnown RBP8.75□□□□□ -1.01
HDAC3-212ENST00000492407 LUZP4Q9P127 313 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-212ENST00000492407 CDC23Q9UJX2 597 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 FBXL4Q9UKA2 621 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 SLC39A10Q9ULF5 831 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 R3HDM2Q9Y2K5 976 aaKnown RBP8.75□□□□□ -1.01
HDAC3-212ENST00000492407 JRKLQ9Y4A0 524 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 NOTCH2Q04721 2471 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 DOPEY1Q5JWR5 2465 aa8.75□□□□□ -1.01
HDAC3-212ENST00000492407 A0A1W2PQ72 361 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 OR51F1A6NGY5 319 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 E7EVH7 732 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 H3BMM5 538 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 PFDN6O15212 129 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 LIASO43766 372 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 E2F6O75461 281 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 CTSBP07858 339 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 ATP5DP30049 168 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 GRIA3P42263 894 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 GLRBP48167 497 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 NPY2RP49146 381 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 ZNF75DP51815 510 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 ADARP55265 1226 aaKnown RBP8.74□□□□□ -1.01
HDAC3-212ENST00000492407 AP2B1P63010 937 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 RELAQ04206 551 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 KRT72Q14CN4 511 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 TUBB8Q3ZCM7 444 aa8.74□□□□□ -1.01
HDAC3-212ENST00000492407 CCDC38Q502W7 563 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms