RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 CSNK1DP48730 415 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 NAA20P61599 178 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 MEF2AQ02078 507 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 COL9A2Q14055 689 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 FXNQ16595 210 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 RUNDC3AQ59EK9 446 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 XKR6Q5GH73 641 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 MPP7Q5T2T1 576 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 ABRAXAS1Q6UWZ7 409 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 KCTD8Q6ZWB6 473 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 GRASPQ7Z6J2 395 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 VTCN1Q7Z7D3 282 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 RBM23Q86U06 439 aaKnown RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 PARP8Q8N3A8 854 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 OR8J3Q8NGG0 315 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 C12orf43Q96C57 262 aaKnown RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 ISOC1Q96CN7 298 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 NPLQ9BXD5 320 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-220ENST00000492280 SLC12A9Q9BXP2 914 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 AMBRA1Q9C0C7 1298 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 ING2Q9H160 280 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 TDP1Q9NUW8 608 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 FBXO10Q9UK96 956 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 SH2B3Q9UQQ2 575 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 PRKAB1Q9Y478 270 aa12.1□□□□□ -0.47
HMGN1-220ENST00000492280 PABPN1LA6NDY0 278 aaKnown RBP12.09□□□□□ -0.47
HMGN1-220ENST00000492280 hCG_2039718K7EN88 272 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 KPNA3O00505 521 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-220ENST00000492280 CREG1O75629 220 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 ADH1AP07327 375 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 NUDT7P0C024 238 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 CD247P20963 164 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 SLC6A12P48065 614 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 IRF8Q02556 426 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 GTF2H3Q13889 308 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 DAG1Q14118 895 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 RAB39AQ14964 217 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 MEP1AQ16819 746 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 MICU2Q8IYU8 434 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 RDH14Q9HBH5 336 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 SPHK2Q9NRA0 654 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 PLXND1Q9Y4D7 1925 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 IGLV3-16A0A075B6K0 115 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 G3V2T6 193 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 ATE1O95260 518 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 IL6P05231 212 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 ABCB1P08183 1280 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-220ENST00000492280 THRBP10828 461 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 UMPSP11172 480 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 CDK4P11802 303 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 MSH3P20585 1137 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 PTPN6P29350 595 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 GSSP48637 474 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 ADARB1P78563 741 aaKnown RBP12.09□□□□□ -0.47
HMGN1-220ENST00000492280 SYTL3Q4VX76 610 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 IRAK1BP1Q5VVH5 260 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 LYPLAL1Q5VWZ2 237 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 FRG2Q64ET8 278 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 PATL1Q86TB9 770 aaKnown RBP12.09□□□□□ -0.47
HMGN1-220ENST00000492280 RASGEF1AQ8N9B8 481 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 FRG2BQ96QU4 278 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 CPPED1Q9BRF8 314 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-220ENST00000492280 MUC13Q9H3R2 512 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 DNAJC11Q9NVH1 559 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 ABCG2Q9UNQ0 655 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 PCDHGA8Q9Y5G5 932 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 DGKBQ9Y6T7 804 aa12.09□□□□□ -0.47
HMGN1-220ENST00000492280 A0A087WXM4 84 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 TRBV5-3A0A0A0MS03 114 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 A0A1W2PPW3 197 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 RFXANKO14593 260 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 SLC16A8O95907 504 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 ALDH3A2P51648 485 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 TPD52P55327 224 aaPredicted RBP12.08□□□□□ -0.48
HMGN1-220ENST00000492280 ACOX1Q15067 660 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 NECAB2Q7Z6G3 386 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 ZDHHC13Q8IUH4 622 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 SYT12Q8IV01 421 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 SH3KBP1Q96B97 665 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 OR4K3Q96R72 315 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 TMEM121BQ9BXQ6 578 aaPredicted RBP12.08□□□□□ -0.48
HMGN1-220ENST00000492280 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.08□□□□□ -0.48
HMGN1-220ENST00000492280 PADI4Q9UM07 663 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 ERVW-1Q9UQF0 538 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 MYO1GB0I1T2 1018 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 WASH3PC4AMC7 463 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 NUAK1O60285 661 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 NTRK1P04629 796 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 TIMP2P16035 220 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 XPAP23025 273 aaPredicted RBP12.08□□□□□ -0.48
HMGN1-220ENST00000492280 MAD2L1Q13257 205 aaPredicted RBP12.08□□□□□ -0.48
HMGN1-220ENST00000492280 KCNAB2Q13303 367 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 UGT8Q16880 541 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 HKDC1Q2TB90 917 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 CTU2Q2VPK5 515 aaKnown RBP12.08□□□□□ -0.48
HMGN1-220ENST00000492280 NOXRED1Q6NXP6 359 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 ZCCHC8Q6NZY4 707 aaKnown RBP12.08□□□□□ -0.48
HMGN1-220ENST00000492280 ZNF621Q6ZSS3 439 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 RAVER1Q8IY67 606 aaKnown RBP12.08□□□□□ -0.48
HMGN1-220ENST00000492280 C12orf76Q8N812 135 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms