RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 CNBD2Q96M20 576 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 OR52B2Q96RD2 323 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 RANBP9Q96S59 729 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 CDRT15Q96T59 188 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 C19orf43Q9BQ61 176 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 NMRAL1Q9HBL8 299 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 TIMMDC1Q9NPL8 285 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 PRDM8Q9NQV8 689 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 SCHIP1Q9P0W5 487 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-219ENST00000491747 RIMS3Q9UJD0 308 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 RAP2CQ9Y3L5 183 aa9.16□□□□□ -0.94
BRCA1-219ENST00000491747 TRBV5-4A0A0C4DH59 114 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 A0A1W2PQM1 296 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 OR2AG2A6NM03 316 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 C1QTNF9BB2RNN3 333 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 GPR89AB7ZAQ6 455 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 SLCO1B7G3V0H7 640 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 G3V2L1 256 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 KMOO15229 486 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 PPM1DO15297 605 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 FAM58BPP0C7Q3 252 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 C1QTNF9P0C862 333 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 GPR89BP0CG08 455 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 RPL14P50914 215 aaKnown RBP9.15□□□□□ -0.94
BRCA1-219ENST00000491747 PRKAA2P54646 552 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 CCL7P80098 99 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 E2F1Q01094 437 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 TARDBPQ13148 414 aaKnown RBP eCLIP9.15□□□□□ -0.94
BRCA1-219ENST00000491747 TSTD2Q5T7W7 516 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 BORAQ6PGQ7 559 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 TMEM220Q6QAJ8 160 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 NAPRTQ6XQN6 538 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 SNX20Q7Z614 316 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 TMPRSS12Q86WS5 348 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 PLD6Q8N2A8 252 aaKnown RBP9.15□□□□□ -0.94
BRCA1-219ENST00000491747 BEND7Q8N7W2 519 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-219ENST00000491747 RDH11Q8TC12 318 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 AGR3Q8TD06 166 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 STON2Q8WXE9 905 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 SGF29Q96ES7 293 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 ATXN7L3BQ96GX2 97 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 FAM210AQ96ND0 272 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 CNTNAP3BQ96NU0 1288 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 CNTNAP3Q9BZ76 1288 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 CHRAC1Q9NRG0 131 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 UBAP1Q9NZ09 502 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 BFARQ9NZS9 450 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 LRIT1Q9P2V4 623 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 CIDEBQ9UHD4 219 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 TCAF1Q9Y4C2 921 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 PIKFYVEQ9Y2I7 2098 aa9.15□□□□□ -0.94
BRCA1-219ENST00000491747 GOLGA8QA0A0J9YX86 632 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 HEATR9A2RTY3 570 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 CCDC162PA2VCL2 907 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 GOLGA8OA6NCC3 632 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 GOLGA8NF8WBI6 632 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 SNX2O60749 519 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 MT-CO3P00414 261 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 CDK4P11802 303 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 ATP6V1B1P15313 513 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 GLB1P16278 677 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 ME2P23368 584 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 NR1H2P55055 460 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 ACVR1Q04771 509 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 ART3Q13508 389 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 FRG1Q14331 258 aaKnown RBP9.15□□□□□ -0.95
BRCA1-219ENST00000491747 HERC3Q15034 1050 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 ZRANB3Q5FWF4 1079 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 CLEC14AQ86T13 490 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 TICAM1Q8IUC6 712 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 TRAPPC5Q8IUR0 188 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 NXPE1Q8N323 547 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 CPSF7Q8N684 471 aaKnown RBP9.15□□□□□ -0.95
BRCA1-219ENST00000491747 Q8N9G6 341 aaPredicted RBP9.15□□□□□ -0.95
BRCA1-219ENST00000491747 BHLHE22Q8NFJ8 381 aaPredicted RBP9.15□□□□□ -0.95
BRCA1-219ENST00000491747 HDAC10Q969S8 669 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 ZNF669Q96BR6 464 aaPredicted RBP9.15□□□□□ -0.95
BRCA1-219ENST00000491747 TSNARE1Q96NA8 513 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 PRPF18Q99633 342 aaKnown RBP9.15□□□□□ -0.95
BRCA1-219ENST00000491747 GRIP2Q9C0E4 1043 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 DRC3Q9H069 523 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 RBM38Q9H0Z9 239 aaKnown RBP9.15□□□□□ -0.95
BRCA1-219ENST00000491747 COPS7BQ9H9Q2 264 aaPredicted RBP9.15□□□□□ -0.95
BRCA1-219ENST00000491747 EFCAB1Q9HAE3 211 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 OXSMQ9NWU1 459 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 GALNT8Q9NY28 637 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 VTI1BQ9UEU0 232 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 CRLS1Q9UJA2 301 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 SLC30A1Q9Y6M5 507 aa9.15□□□□□ -0.95
BRCA1-219ENST00000491747 NTN3O00634 580 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 B4GAT1O43505 415 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 POP7O75817 140 aaKnown RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 C2P06681 752 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 JUPP14923 745 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 XRCC1P18887 633 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 MSH3P20585 1137 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 NMBRP28336 390 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 AKT1P31749 480 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 CLCNKAP51800 687 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 PDX1P52945 283 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms