RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 RASGEF1AQ8N9B8 481 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 KBTBD8Q8NFY9 601 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 C9orf43Q8TAL5 461 aaPredicted RBP3.54□□□□□ -1.84
CD46-216ENST00000490278 KCNE4Q8WWG9 221 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 ZNF501Q96CX3 271 aaPredicted RBP3.54□□□□□ -1.84
CD46-216ENST00000490278 GIMAP5Q96F15 307 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 SPATA33Q96N06 139 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 F2RL3Q96RI0 385 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 GTPBP2Q9BX10 602 aaKnown RBP3.54□□□□□ -1.84
CD46-216ENST00000490278 ZMYND12Q9H0C1 365 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 CPVLQ9H3G5 476 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 SH3GLB2Q9NR46 395 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 GSN-AS1Q9NRJ2 163 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 INTS9Q9NV88 658 aaKnown RBP3.54□□□□□ -1.84
CD46-216ENST00000490278 CHCHD3Q9NX63 227 aaKnown RBP3.54□□□□□ -1.84
CD46-216ENST00000490278 SMCHD1A6NHR9 2005 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 NOTCH4Q99466 2003 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 TRAV24A0A0B4J272 114 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 A0A1W2PRQ8 180 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 PRR23AA6NEV1 266 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 WDR46O15213 610 aaKnown RBP3.53□□□□□ -1.84
CD46-216ENST00000490278 SNX3O60493 162 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 ATP6AP2O75787 350 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 NADKO95544 446 aaPredicted RBP3.53□□□□□ -1.84
CD46-216ENST00000490278 EML2O95834 649 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 GSRP00390 522 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 GBAP04062 536 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 PATE4P0C8F1 98 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 TCF4P15884 667 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 SP100P23497 879 aaPredicted RBP3.53□□□□□ -1.84
CD46-216ENST00000490278 WNT5AP41221 380 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 VAMP7P51809 220 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 BMXP51813 675 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 NAGLUP54802 743 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 RBP5P82980 135 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 ROR1Q01973 937 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 SQLEQ14534 574 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 HERC3Q15034 1050 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 RRS1Q15050 365 aaKnown RBP3.53□□□□□ -1.84
CD46-216ENST00000490278 UGCGQ16739 394 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 FAM174BQ3ZCQ3 159 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 ZNF876PQ49A33 203 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 PDLIM3Q53GG5 364 aaPredicted RBP3.53□□□□□ -1.84
CD46-216ENST00000490278 XKR3Q5GH77 459 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 FAM53AQ6NSI3 398 aaPredicted RBP3.53□□□□□ -1.84
CD46-216ENST00000490278 CAVIN1Q6NZI2 390 aaKnown RBP3.53□□□□□ -1.84
CD46-216ENST00000490278 C15orf39Q6ZRI6 1047 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 SPATA21Q7Z572 469 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 ZNF329Q86UD4 541 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 FAM219AQ8IW50 185 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 KLHDC8BQ8IXV7 354 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 NKAIN3Q8N8D7 197 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 NOA1Q8NC60 698 aaKnown RBP3.53□□□□□ -1.84
CD46-216ENST00000490278 OR13C3Q8NGS6 347 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 DEPDC1BQ8WUY9 529 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 HPSE2Q8WWQ2 592 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 FAM162AQ96A26 154 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 MTMR12Q9C0I1 747 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 TLE6Q9H808 572 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 CHST11Q9NPF2 352 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 GRID1Q9ULK0 1009 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 TNNQ9UQP3 1299 aa3.53□□□□□ -1.84
CD46-216ENST00000490278 TRAV34A0A0B4J273 112 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 HTR3EA5X5Y0 456 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 O00370 1275 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 KLF11O14901 512 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 LINC01565O15544 149 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 GRID2O43424 1007 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 TRMUO75648 421 aaKnown RBP3.52□□□□□ -1.85
CD46-216ENST00000490278 LUC7L3O95232 432 aaKnown RBP3.52□□□□□ -1.85
CD46-216ENST00000490278 SIX3O95343 332 aaPredicted RBP3.52□□□□□ -1.85
CD46-216ENST00000490278 MOCS3O95396 460 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 DARSP14868 501 aaKnown RBP3.52□□□□□ -1.85
CD46-216ENST00000490278 GLULP15104 373 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 ADRA2CP18825 462 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 CD27P26842 260 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 HOXC13P31276 330 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 MAP2K2P36507 400 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 PRKCIP41743 596 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 MAGEA11P43364 429 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 CRKLP46109 303 aaKnown RBP3.52□□□□□ -1.85
CD46-216ENST00000490278 RGS7P49802 495 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 GSDMDP57764 484 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 ILF2Q12905 390 aaKnown RBP3.52□□□□□ -1.85
CD46-216ENST00000490278 BFSP1Q12934 665 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 PTGISQ16647 500 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 LACTB2Q53H82 288 aaPredicted RBP3.52□□□□□ -1.85
CD46-216ENST00000490278 SHEQ5VZ18 495 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 FAM91A1Q658Y4 838 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 OR4A47Q6IF82 309 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 SPATA19Q7Z5L4 167 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 GLRX5Q86SX6 157 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 TIGD4Q8IY51 512 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 MARVELD2Q8N4S9 558 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 OR10Q1Q8NGQ4 319 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 OR4C3Q8NH37 302 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 FAM76AQ8TAV0 307 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 TMEM190Q8WZ59 177 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 SUSD6Q92537 303 aa3.52□□□□□ -1.85
CD46-216ENST00000490278 NSMAFQ92636 917 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms