RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 TLE6Q9H808 572 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 RNF215Q9Y6U7 377 aa4.47□□□□□ -1.69
CCDC39-206ENST00000489868 P4HA2O15460 535 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 GLRA3O75311 464 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 DPEP1P16444 411 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 BDNFP23560 247 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 OPRL1P41146 370 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 CCR10P46092 362 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 RALGDSQ12967 914 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 PDLIM3Q53GG5 364 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-206ENST00000489868 ZNF772Q68DY9 489 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-206ENST00000489868 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-206ENST00000489868 NAA16Q6N069 864 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-206ENST00000489868 UGT3A1Q6NUS8 523 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 RBPMS2Q6ZRY4 209 aaKnown RBP4.46□□□□□ -1.7
CCDC39-206ENST00000489868 IL17RELQ6ZVW7 336 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 IQCHQ86VS3 1027 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 HOGA1Q86XE5 327 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 LSMEM2Q8N112 164 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 POMGNT2Q8NAT1 580 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 SLC4A11Q8NBS3 891 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 OR10Q1Q8NGQ4 319 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 OR13C3Q8NGS6 347 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 VANGL1Q8TAA9 524 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-206ENST00000489868 SMAP2Q8WU79 429 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-206ENST00000489868 CENPTQ96BT3 561 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 PGAP3Q96FM1 320 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-206ENST00000489868 WBP1Q96G27 269 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 ATOH8Q96SQ7 321 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 FEVQ99581 238 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 SYT15Q9BQS2 421 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 MAN2C1Q9NTJ4 1040 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 ERAP1Q9NZ08 941 aa4.46□□□□□ -1.7
CCDC39-206ENST00000489868 CACNA1FO60840 1977 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 H7C423 109 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 FPGTO14772 594 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 ARPC2O15144 300 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 CDK2AP2O75956 126 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 SORBS2O94875 1100 aaKnown RBP4.45□□□□□ -1.7
CCDC39-206ENST00000489868 ATP5BP06576 529 aaKnown RBP4.45□□□□□ -1.7
CCDC39-206ENST00000489868 CSN3P07498 182 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 ZSCAN5DPP0CG00 497 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 CYP2A7P20853 494 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 CPT2P23786 658 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 CSTF2P33240 577 aaKnown RBP eCLIP4.45□□□□□ -1.7
CCDC39-206ENST00000489868 DRP2Q13474 957 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 PTPRCAPQ14761 206 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 EXT1Q16394 746 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 CRY2Q49AN0 593 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 SLC35D3Q5M8T2 416 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 ZNF613Q6PF04 617 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 ZBTB49Q6ZSB9 765 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 LGI2Q8N0V4 545 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 XXYLT1Q8NBI6 393 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 MOB3AQ96BX8 217 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 OTUB1Q96FW1 271 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-206ENST00000489868 FAM71F1Q96KD3 344 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-206ENST00000489868 VGLL1Q99990 258 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 SLC2A11Q9BYW1 496 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 ANKRD2Q9GZV1 360 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 TRPV4Q9HBA0 871 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 STK26Q9P289 416 aa4.45□□□□□ -1.7
CCDC39-206ENST00000489868 A0A1W2PR80 420 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 MEX3AA1L020 520 aaKnown RBP4.44□□□□□ -1.7
CCDC39-206ENST00000489868 URADA6NGE7 173 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 CASTOR2A6NHX0 329 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 UBE2CO00762 179 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 SEC24AO95486 1093 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 C22orf31O95567 290 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 OR52Z1P0C646 297 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 CAPZA2P47755 286 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 LBX1P52954 281 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 CSE1LP55060 971 aaKnown RBP4.44□□□□□ -1.7
CCDC39-206ENST00000489868 PAX9P55771 341 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 CLDN15P56746 228 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 GSDMDP57764 484 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 ACSM1Q08AH1 577 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 CUL3Q13618 768 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 TMEM266Q2M3C6 531 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 SGSM1Q2NKQ1 1148 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 ANKRD13CQ8N6S4 541 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 KLHDC1Q8N7A1 406 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 NIPA2Q8N8Q9 360 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 OR4K1Q8NGD4 311 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 OR10G8Q8NGN5 311 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 APOBEC4Q8WW27 367 aaKnown RBP4.44□□□□□ -1.7
CCDC39-206ENST00000489868 ZNF486Q96H40 463 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-206ENST00000489868 NECTIN4Q96NY8 510 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 CABLES2Q9BTV7 478 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 MCRIP2Q9BUT9 160 aaKnown RBP4.44□□□□□ -1.7
CCDC39-206ENST00000489868 CDH20Q9HBT6 801 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 PIH1D3Q9NQM4 214 aaKnown RBP4.44□□□□□ -1.7
CCDC39-206ENST00000489868 OR6C2Q9NZP2 312 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 PAK5Q9P286 719 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 C5AR2Q9P296 337 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 CPSF3Q9UKF6 684 aaKnown RBP4.44□□□□□ -1.7
CCDC39-206ENST00000489868 PPP1R3CQ9UQK1 317 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 PRSS21Q9Y6M0 314 aa4.44□□□□□ -1.7
CCDC39-206ENST00000489868 IGLV7-46A0A075B6I9 117 aa4.43□□□□□ -1.7
CCDC39-206ENST00000489868 A0A0J9YWU9 116 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms