RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 GCGRP47871 477 aa18.25■□□□□ 0.51
MRPL55-230ENST00000489430 RGS4P49798 205 aa18.25■□□□□ 0.51
MRPL55-230ENST00000489430 ITGA8P53708 1063 aa18.25■□□□□ 0.51
MRPL55-230ENST00000489430 DCDP81605 110 aaKnown RBP18.25■□□□□ 0.51
MRPL55-230ENST00000489430 RELAQ04206 551 aa18.25■□□□□ 0.51
MRPL55-230ENST00000489430 NFATC3Q12968 1075 aa18.25■□□□□ 0.51
MRPL55-230ENST00000489430 DEFB110Q30KQ9 67 aa18.25■□□□□ 0.51
MRPL55-230ENST00000489430 ATP1A1-AS1Q5TC04 95 aa18.25■□□□□ 0.51
MRPL55-230ENST00000489430 FCRL6Q6DN72 434 aa18.25■□□□□ 0.51
MRPL55-230ENST00000489430 TAX1BP1Q86VP1 789 aa18.25■□□□□ 0.51
MRPL55-230ENST00000489430 IGDCC3Q8IVU1 814 aa18.25■□□□□ 0.51
MRPL55-230ENST00000489430 ENDOVQ8N8Q3 282 aaKnown RBP18.25■□□□□ 0.51
MRPL55-230ENST00000489430 SLC30A3Q99726 388 aa18.25■□□□□ 0.51
MRPL55-230ENST00000489430 SPRTNQ9H040 489 aaPredicted RBP18.25■□□□□ 0.51
MRPL55-230ENST00000489430 TXLNGQ9NUQ3 528 aa18.25■□□□□ 0.51
MRPL55-230ENST00000489430 UTP6Q9NYH9 597 aaKnown RBP18.25■□□□□ 0.51
MRPL55-230ENST00000489430 TRMT6Q9UJA5 497 aaKnown RBP18.25■□□□□ 0.51
MRPL55-230ENST00000489430 MAN2B2Q9Y2E5 1009 aa18.25■□□□□ 0.51
MRPL55-230ENST00000489430 BOD1L1Q8NFC6 3051 aa18.25■□□□□ 0.51
MRPL55-230ENST00000489430 SPTA1P02549 2419 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 FITM1A5D6W6 292 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 E7ESA3 106 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 CCNDBP1O95273 360 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 ONECUT2O95948 504 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 AHSGP02765 367 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 GABRB3P28472 473 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 PNLIPRP1P54315 467 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 GRM7Q14831 915 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 TEDDM1Q5T9Z0 273 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 LCN10Q6JVE6 187 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 FAM20CQ8IXL6 584 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 ZNF655Q8N720 491 aaPredicted RBP18.24■□□□□ 0.51
MRPL55-230ENST00000489430 SPATA4Q8NEY3 305 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 C9orf43Q8TAL5 461 aaPredicted RBP18.24■□□□□ 0.51
MRPL55-230ENST00000489430 ADAMTS17Q8TE56 1095 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 IP6K3Q96PC2 410 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 RUFY1Q96T51 708 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 KRT12Q99456 494 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 TRIM51Q9BSJ1 452 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 PLAC1Q9HBJ0 212 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 IRAK4Q9NWZ3 460 aa18.24■□□□□ 0.51
MRPL55-230ENST00000489430 HEMK1Q9Y5R4 338 aaPredicted RBP18.24■□□□□ 0.51
MRPL55-230ENST00000489430 TLN1Q9Y490 2541 aaKnown RBP18.24■□□□□ 0.51
MRPL55-230ENST00000489430 MKRN2OSH3BPM6 223 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 BANF1O75531 89 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 RFPL1O75677 317 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 SLC16A8O95907 504 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 C8GP07360 202 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 PIM1P11309 404 aaPredicted RBP18.23■□□□□ 0.51
MRPL55-230ENST00000489430 PLA2G2AP14555 144 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 CASQ1P31415 396 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 CARSP49589 748 aaKnown RBP18.23■□□□□ 0.51
MRPL55-230ENST00000489430 RPS18P62269 152 aaKnown RBP18.23■□□□□ 0.51
MRPL55-230ENST00000489430 ABATP80404 500 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 PRDX1Q06830 199 aaKnown RBP18.23■□□□□ 0.51
MRPL55-230ENST00000489430 SP140Q13342 867 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 CUL1Q13616 776 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 FAM214AQ32MH5 1076 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 PTCHD3Q3KNS1 767 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 RNF44Q7L0R7 432 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 CPNE9Q8IYJ1 553 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 ZNF480Q8WV37 535 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 NACC2Q96BF6 587 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 ABHD17AQ96GS6 310 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 PKP4Q99569 1192 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 MIPEPQ99797 713 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 SELENOSQ9BQE4 189 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 ERP44Q9BS26 406 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 PPANQ9NQ55 473 aaKnown RBP18.23■□□□□ 0.51
MRPL55-230ENST00000489430 WHRNQ9P202 907 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 CHMP2BQ9UQN3 213 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 KLHL20Q9Y2M5 609 aa18.23■□□□□ 0.51
MRPL55-230ENST00000489430 BSNQ9UPA5 3926 aa18.22■□□□□ 0.51
MRPL55-230ENST00000489430 A0A1B0GX78 115 aa18.22■□□□□ 0.51
MRPL55-230ENST00000489430 OR2A25A4D2G3 310 aa18.22■□□□□ 0.51
MRPL55-230ENST00000489430 E7ENX8 843 aa18.22■□□□□ 0.51
MRPL55-230ENST00000489430 SLC16A5O15375 505 aa18.22■□□□□ 0.51
MRPL55-230ENST00000489430 RPA3P35244 121 aaPredicted RBP18.22■□□□□ 0.51
MRPL55-230ENST00000489430 RPL21P46778 160 aaKnown RBP18.22■□□□□ 0.51
MRPL55-230ENST00000489430 EMP3P54852 163 aa18.22■□□□□ 0.51
MRPL55-230ENST00000489430 TAP2Q03519 686 aa18.22■□□□□ 0.51
MRPL55-230ENST00000489430 CALCOCO2Q13137 446 aa18.22■□□□□ 0.51
MRPL55-230ENST00000489430 IL10RAQ13651 578 aa18.22■□□□□ 0.51
MRPL55-230ENST00000489430 FASTKQ14296 549 aaKnown RBP18.22■□□□□ 0.51
MRPL55-230ENST00000489430 TCTN3Q6NUS6 607 aa18.22■□□□□ 0.51
MRPL55-230ENST00000489430 MCOLN3Q8TDD5 553 aa18.22■□□□□ 0.51
MRPL55-230ENST00000489430 FKBP10Q96AY3 582 aa18.22■□□□□ 0.51
MRPL55-230ENST00000489430 WDR83Q9BRX9 315 aaKnown RBP18.22■□□□□ 0.51
MRPL55-230ENST00000489430 MOCS1Q9NZB8 636 aa18.22■□□□□ 0.51
MRPL55-230ENST00000489430 GPN3Q9UHW5 284 aaPredicted RBP18.22■□□□□ 0.51
MRPL55-230ENST00000489430 EIF3HO15372 352 aaKnown RBP eCLIP18.21■□□□□ 0.51
MRPL55-230ENST00000489430 SUV39H1O43463 412 aa18.21■□□□□ 0.51
MRPL55-230ENST00000489430 CTSVO60911 334 aa18.21■□□□□ 0.51
MRPL55-230ENST00000489430 KLF7O75840 302 aaPredicted RBP18.21■□□□□ 0.51
MRPL55-230ENST00000489430 ALBP02768 609 aa18.21■□□□□ 0.51
MRPL55-230ENST00000489430 HRH2P25021 359 aa18.21■□□□□ 0.51
MRPL55-230ENST00000489430 MCM3P25205 808 aa18.21■□□□□ 0.51
MRPL55-230ENST00000489430 PSMB5P28074 263 aa18.21■□□□□ 0.51
MRPL55-230ENST00000489430 TIAL1Q01085 375 aaKnown RBP eCLIP18.21■□□□□ 0.51
MRPL55-230ENST00000489430 SSPNQ14714 243 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms