RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 KBTBD6Q86V97 674 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 NXPE1Q8N323 547 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 LINC01465Q8N7H1 131 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 OR4F6Q8NGB9 312 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 TOX2Q96NM4 488 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 ZBTB26Q9HCK0 441 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 CSNK1G1Q9HCP0 422 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 SAMD4AQ9UPU9 718 aaKnown RBP10.76□□□□□ -0.69
HDAC6-228ENST00000486227 MYOCOSA0A1B0GUC4 107 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 FAM234BA2RU67 622 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 ANKRD33BA6NCL7 494 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 OR6A2O95222 327 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 ITGBL1O95965 494 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-228ENST00000486227 CST5P28325 142 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-228ENST00000486227 CMPK1P30085 196 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 HNF1BP35680 557 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 ARRB1P49407 418 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-228ENST00000486227 AGTR2P50052 363 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 DGKQP52824 942 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 MAPK12P53778 367 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 RAB33AQ14088 237 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 TYSND1Q2T9J0 566 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 UGT2A3Q6UWM9 527 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 EIF3MQ7L2H7 374 aaKnown RBP10.76□□□□□ -0.69
HDAC6-228ENST00000486227 CDH24Q86UP0 819 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 GATAD2AQ86YP4 633 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 SLC32A1Q9H598 525 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 CCDC182A6NF36 153 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 LOC730098B7Z3J9 87 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 BUD31P41223 144 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-228ENST00000486227 ETV4P43268 484 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 ZNF678Q5SXM1 525 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 C12orf66Q96MD2 445 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 CNOT11Q9UKZ1 510 aaKnown RBP10.76□□□□□ -0.69
HDAC6-228ENST00000486227 OAZ3Q9UMX2 235 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 RUVBL1Q9Y265 456 aaKnown RBP10.76□□□□□ -0.69
HDAC6-228ENST00000486227 MAP4K5Q9Y4K4 846 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 ZNF780BQ9Y6R6 833 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 KIAA1551Q9HCM1 1747 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 SLC22A1O15245 554 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 TNFRSF21O75509 655 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 ANGPTL1O95841 491 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 IL6P05231 212 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 CDK4P11802 303 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 IFNGR2P38484 337 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 TUBA3CQ13748 450 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 CARTPTQ16568 116 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 PTCHD3Q3KNS1 767 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 RBM48Q5RL73 367 aaKnown RBP10.76□□□□□ -0.69
HDAC6-228ENST00000486227 GLB1L3Q8NCI6 653 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-228ENST00000486227 FBXO27Q8NI29 283 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 METTL21AQ8WXB1 218 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 KXD1Q9BQD3 176 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 SPHK2Q9NRA0 654 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 OSER1Q9NX31 292 aa10.76□□□□□ -0.69
HDAC6-228ENST00000486227 SAP18O00422 153 aaKnown RBP10.75□□□□□ -0.69
HDAC6-228ENST00000486227 TGM5O43548 720 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 RGS10O43665 173 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 SOCS5O75159 536 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 UGT2B11O75310 529 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 SERPINB7O75635 380 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 ACP5P13686 325 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 ZNF30P17039 623 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 ALAS2P22557 587 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 STT3AP46977 705 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 PSAPL1Q6NUJ1 521 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 ENPP7Q6UWV6 458 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 ZNF783Q6ZMS7 281 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 DEF8Q6ZN54 512 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 SPATA5L1Q9BVQ7 753 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 MAGEE1Q9HCI5 957 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 EQTNQ9NQ60 294 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 TCRBV5S1A1TA0A578 114 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 OR10H3O60404 316 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 SNNO75324 88 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-228ENST00000486227 POP7O75817 140 aaKnown RBP10.75□□□□□ -0.69
HDAC6-228ENST00000486227 TFPTP0C1Z6 253 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 PLA2G16P53816 162 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 ITGA1P56199 1179 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 AP1S2P56377 157 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 NFATC2Q13469 925 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 TECRLQ5HYJ1 363 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 RAB41Q5JT25 222 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 BORAQ6PGQ7 559 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 GOLGA7Q7Z5G4 137 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 HIPK1Q86Z02 1210 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 APCDD1Q8J025 514 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 SUN5Q8TC36 379 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 CASD1Q96PB1 797 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 P2RY13Q9BPV8 354 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 MCOLN1Q9GZU1 580 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 CARS2Q9HA77 564 aaKnown RBP10.75□□□□□ -0.69
HDAC6-228ENST00000486227 IKZF3Q9UKT9 509 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 SLC9A8Q9Y2E8 581 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 USP3Q9Y6I4 520 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 MYO7AQ13402 2215 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 CAPN14A8MX76 684 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 TMEM189-UBE2V1I3L0A0 370 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 BCKDKO14874 412 aa10.75□□□□□ -0.69
HDAC6-228ENST00000486227 LEFTY1O75610 366 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms