RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TRIM56Q9BRZ2 755 aaKnown RBP9.65□□□□□ -0.86
CPSF4-213ENST00000484112 NUDT9Q9BW91 350 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 CHRNA10Q9GZZ6 450 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 DPH5Q9H2P9 285 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 FAM114A2Q9NRY5 505 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 C1GALT1Q9NS00 363 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 IARS2Q9NSE4 1012 aaKnown RBP9.65□□□□□ -0.86
CPSF4-213ENST00000484112 ZFATQ9P243 1243 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 CHMP2BQ9UQN3 213 aa9.65□□□□□ -0.86
CPSF4-213ENST00000484112 OR6C74A6NCV1 312 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 IQCF5A8MTL0 148 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 NIPSNAP2O75323 286 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 ZBTB11O95625 1053 aaPredicted RBP9.64□□□□□ -0.87
CPSF4-213ENST00000484112 MPC1LP0DKB6 136 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 ERVK-10P10266 1014 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 HSD17B2P37059 387 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 RAB28P51157 221 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 PLTPP55058 493 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 TUBB4BP68371 445 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 HSD11B2P80365 405 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 KIR2DS3Q14952 304 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 NR6A1Q15406 480 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 KYNUQ16719 465 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 TMTC4Q5T4D3 741 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 TEDDM1Q5T9Z0 273 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 PRAMEF17Q5VTA0 474 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 SLC6A19Q695T7 634 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 LCN10Q6JVE6 187 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 DUS1LQ6P1R4 473 aaKnown RBP9.64□□□□□ -0.87
CPSF4-213ENST00000484112 FBXO38Q6PIJ6 1188 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 RELL1Q8IUW5 271 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 IGDCC3Q8IVU1 814 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 PALM2Q8IXS6 379 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 KRT222Q8N1A0 295 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 D2HGDHQ8N465 521 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 RBMXL3Q8N7X1 1067 aaKnown RBP9.64□□□□□ -0.87
CPSF4-213ENST00000484112 ENDOVQ8N8Q3 282 aaKnown RBP9.64□□□□□ -0.87
CPSF4-213ENST00000484112 Q8NA96 180 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 SLC38A9Q8NBW4 561 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 FBXO15Q8NCQ5 510 aaPredicted RBP9.64□□□□□ -0.87
CPSF4-213ENST00000484112 OR4E2Q8NGC2 313 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 OR5AR1Q8NGP9 310 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 OR8K5Q8NH50 307 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 HMGCLL1Q8TB92 370 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 LKAAEAR1Q8TD35 194 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 CLIP3Q96DZ5 547 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 CFAP36Q96G28 342 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 TCTN2Q96GX1 697 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 AARSD1Q9BTE6 412 aaKnown RBP9.64□□□□□ -0.87
CPSF4-213ENST00000484112 LRRC1Q9BTT6 524 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 PITPNM3Q9BZ71 974 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 PPANQ9NQ55 473 aaKnown RBP9.64□□□□□ -0.87
CPSF4-213ENST00000484112 FBXO6Q9NRD1 293 aaPredicted RBP9.64□□□□□ -0.87
CPSF4-213ENST00000484112 SOHLH2Q9NX45 425 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 TAS2R13Q9NYV9 303 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 SPATA7Q9P0W8 599 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 MTRF1LQ9UGC7 380 aaKnown RBP9.64□□□□□ -0.87
CPSF4-213ENST00000484112 ERRFI1Q9UJM3 462 aaPredicted RBP9.64□□□□□ -0.87
CPSF4-213ENST00000484112 POMT2Q9UKY4 750 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 BTRCQ9Y297 605 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 DHRS7Q9Y394 339 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 PCDHGB7Q9Y5F8 929 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 CACNA1DQ01668 2161 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 ESPL1Q14674 2120 aa9.64□□□□□ -0.87
CPSF4-213ENST00000484112 NOTCH2Q04721 2471 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 SPTAN1Q13813 2472 aaKnown RBP9.63□□□□□ -0.87
CPSF4-213ENST00000484112 ZNF839A8K0R7 811 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 RASGRF2O14827 1237 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 ZNF500O60304 480 aaPredicted RBP9.63□□□□□ -0.87
CPSF4-213ENST00000484112 PSIP1O75475 530 aaKnown RBP9.63□□□□□ -0.87
CPSF4-213ENST00000484112 BANF1O75531 89 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 HAUS5O94927 633 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 AHSGP02765 367 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 ATXN8OSP0DMR3 200 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 VARSP26640 1264 aaKnown RBP9.63□□□□□ -0.87
CPSF4-213ENST00000484112 CARSP49589 748 aaKnown RBP9.63□□□□□ -0.87
CPSF4-213ENST00000484112 RGS4P49798 205 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 ITGA1P56199 1179 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 NAB1Q13506 487 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 ARHGAP19Q14CB8 494 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 NAA25Q14CX7 972 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 BRD3Q15059 726 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 ZNF789Q5FWF6 425 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 FAM45BPQ6NSW5 357 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 ZNF549Q6P9A3 640 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 MICALCLQ6ZW33 695 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 VRK3Q8IV63 474 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 SRRM1Q8IYB3 904 aaKnown RBP9.63□□□□□ -0.87
CPSF4-213ENST00000484112 ADGRF3Q8IZF5 1079 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 CNPY4Q8N129 248 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 CISD2Q8N5K1 135 aaKnown RBP9.63□□□□□ -0.87
CPSF4-213ENST00000484112 FAM45AQ8TCE6 357 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 FBXO25Q8TCJ0 367 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 ADAMTS17Q8TE56 1095 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 PNPLA2Q96AD5 504 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 ZNF501Q96CX3 271 aaPredicted RBP9.63□□□□□ -0.87
CPSF4-213ENST00000484112 PPM1MQ96MI6 270 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 PWWP2AQ96N64 755 aa9.63□□□□□ -0.87
CPSF4-213ENST00000484112 WDR83Q9BRX9 315 aaKnown RBP9.63□□□□□ -0.87
CPSF4-213ENST00000484112 HGH1Q9BTY7 390 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms