RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 RAB42Q8N4Z0 105 aa18.52■□□□□ 0.56
CHPF2-203ENST00000482173 ZNF285Q96NJ3 590 aa18.52■□□□□ 0.56
CHPF2-203ENST00000482173 MIPEPQ99797 713 aa18.52■□□□□ 0.56
CHPF2-203ENST00000482173 WDR77Q9BQA1 342 aaPredicted RBP18.52■□□□□ 0.56
CHPF2-203ENST00000482173 MRM3Q9HC36 420 aaKnown RBP18.52■□□□□ 0.56
CHPF2-203ENST00000482173 TREX1Q9NSU2 369 aa18.52■□□□□ 0.56
CHPF2-203ENST00000482173 IL1RAPL1Q9NZN1 696 aa18.52■□□□□ 0.56
CHPF2-203ENST00000482173 CTSFQ9UBX1 484 aa18.52■□□□□ 0.56
CHPF2-203ENST00000482173 NXT1Q9UKK6 140 aaKnown RBP18.52■□□□□ 0.56
CHPF2-203ENST00000482173 GUCA1BQ9UMX6 200 aa18.52■□□□□ 0.56
CHPF2-203ENST00000482173 RUVBL2Q9Y230 463 aaKnown RBP18.52■□□□□ 0.56
CHPF2-203ENST00000482173 SLC5A6Q9Y289 635 aa18.52■□□□□ 0.56
CHPF2-203ENST00000482173 MRFAP1Q9Y605 127 aa18.52■□□□□ 0.56
CHPF2-203ENST00000482173 HS3ST3B1Q9Y662 390 aa18.52■□□□□ 0.56
CHPF2-203ENST00000482173 NFS1Q9Y697 457 aa18.52■□□□□ 0.56
CHPF2-203ENST00000482173 FITM1A5D6W6 292 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 KRT87PA6NCN2 255 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 CTSVO60911 334 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 PSMB5P28074 263 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 NMBRP28336 390 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 BDKRB1P46663 353 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 RBBP7Q16576 425 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 AGAP7PQ5VUJ5 663 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 MAMDC2Q7Z304 686 aaPredicted RBP18.51■□□□□ 0.55
CHPF2-203ENST00000482173 LRRC6Q86X45 466 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 PARP9Q8IXQ6 854 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 UBE2Q2Q8WVN8 375 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 C5orf34Q96MH7 638 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 FOPNLQ96NB1 174 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 AGAP4Q96P64 663 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 BARD1Q99728 777 aaKnown RBP18.51■□□□□ 0.55
CHPF2-203ENST00000482173 ENAMQ9NRM1 1142 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 AGPAT4Q9NRZ5 378 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 CSAG2Q9Y5P2 127 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 MAU2Q9Y6X3 613 aa18.51■□□□□ 0.55
CHPF2-203ENST00000482173 CNTRLQ7Z7A1 2325 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 A0A0J9YVX5 310 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 HYKKA2RU49 373 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 LDLRP01130 860 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 RPS3P23396 243 aaKnown RBP eCLIP18.5■□□□□ 0.551e-7■■□□□ 12.8
CHPF2-203ENST00000482173 COL8A1P27658 744 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 NPY2RP49146 381 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 EIF3BP55884 814 aaKnown RBP18.5■□□□□ 0.55
CHPF2-203ENST00000482173 CCNG2Q16589 344 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 TUBB8Q3ZCM7 444 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 FRMPD2BQ6IN97 320 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 CNSTQ6PJW8 725 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 MPP5Q8N3R9 675 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 DTWD1Q8N5C7 304 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 OTUD6BQ8N6M0 293 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 SPC24Q8NBT2 197 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 OR2L3Q8NG85 312 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 HMGCLL1Q8TB92 370 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 DNAJB14Q8TBM8 379 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 PPP4R1Q8TF05 950 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 VPS50Q96JG6 964 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 IL22Q9GZX6 179 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 EIF2B3Q9NR50 452 aaKnown RBP18.5■□□□□ 0.55
CHPF2-203ENST00000482173 SEMA3GQ9NS98 782 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 BFARQ9NZS9 450 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 ZC3H7BQ9UGR2 993 aaKnown RBP18.5■□□□□ 0.55
CHPF2-203ENST00000482173 TSR3Q9UJK0 312 aaKnown RBP18.5■□□□□ 0.55
CHPF2-203ENST00000482173 NOVA2Q9UNW9 492 aaKnown RBP18.5■□□□□ 0.55
CHPF2-203ENST00000482173 FAM169AQ9Y6X4 670 aa18.5■□□□□ 0.55
CHPF2-203ENST00000482173 VSTM2BA6NLU5 285 aa18.49■□□□□ 0.55
CHPF2-203ENST00000482173 CLDN1O95832 211 aa18.49■□□□□ 0.55
CHPF2-203ENST00000482173 EIF2S1P05198 315 aaKnown RBP18.49■□□□□ 0.55
CHPF2-203ENST00000482173 CCNFP41002 786 aa18.49■□□□□ 0.55
CHPF2-203ENST00000482173 BASP1P80723 227 aaKnown RBP18.49■□□□□ 0.55
CHPF2-203ENST00000482173 RPS6KA1Q15418 735 aa18.49■□□□□ 0.55
CHPF2-203ENST00000482173 IGFL2Q6UWQ7 119 aa18.49■□□□□ 0.55
CHPF2-203ENST00000482173 OR11G2Q8NGC1 345 aa18.49■□□□□ 0.55
CHPF2-203ENST00000482173 OR2A1Q8NGT9 310 aa18.49■□□□□ 0.55
CHPF2-203ENST00000482173 MAGEC3Q8TD91 643 aa18.49■□□□□ 0.55
CHPF2-203ENST00000482173 THOC3Q96J01 351 aaKnown RBP18.49■□□□□ 0.55
CHPF2-203ENST00000482173 CRB3Q9BUF7 120 aa18.49■□□□□ 0.55
CHPF2-203ENST00000482173 TSGA10Q9BZW7 698 aa18.49■□□□□ 0.55
CHPF2-203ENST00000482173 LHPPQ9H008 270 aa18.49■□□□□ 0.55
CHPF2-203ENST00000482173 ZNF304Q9HCX3 659 aa18.49■□□□□ 0.55
CHPF2-203ENST00000482173 DRG1Q9Y295 367 aaKnown RBP18.49■□□□□ 0.55
CHPF2-203ENST00000482173 KLK4Q9Y5K2 254 aa18.49■□□□□ 0.55
CHPF2-203ENST00000482173 CACNA1DQ01668 2161 aa18.49■□□□□ 0.55
CHPF2-203ENST00000482173 DOPEY1Q5JWR5 2465 aa18.49■□□□□ 0.55
CHPF2-203ENST00000482173 LOC105369274A0A096LPK9 316 aa18.48■□□□□ 0.55
CHPF2-203ENST00000482173 LOC102723532A0A0G2JNH3 316 aa18.48■□□□□ 0.55
CHPF2-203ENST00000482173 AP3B1O00203 1094 aa18.48■□□□□ 0.55
CHPF2-203ENST00000482173 NRP2O60462 931 aa18.48■□□□□ 0.55
CHPF2-203ENST00000482173 VAPBO95292 243 aa18.48■□□□□ 0.55
CHPF2-203ENST00000482173 MED26O95402 600 aa18.48■□□□□ 0.55
CHPF2-203ENST00000482173 MGAT1P26572 445 aa18.48■□□□□ 0.55
CHPF2-203ENST00000482173 OCA2Q04671 838 aa18.48■□□□□ 0.55
CHPF2-203ENST00000482173 SIX1Q15475 284 aaPredicted RBP18.48■□□□□ 0.55
CHPF2-203ENST00000482173 CTSL3PQ5NE16 218 aa18.48■□□□□ 0.55
CHPF2-203ENST00000482173 ZNF787Q6DD87 383 aa18.48■□□□□ 0.55
CHPF2-203ENST00000482173 CES3Q6UWW8 571 aa18.48■□□□□ 0.55
CHPF2-203ENST00000482173 C4orf22Q6V702 233 aa18.48■□□□□ 0.55
CHPF2-203ENST00000482173 GSTA5Q7RTV2 222 aa18.48■□□□□ 0.55
CHPF2-203ENST00000482173 SDCCAG8Q86SQ7 713 aaPredicted RBP18.48■□□□□ 0.55
CHPF2-203ENST00000482173 OR4N4Q8N0Y3 316 aa18.48■□□□□ 0.55
CHPF2-203ENST00000482173 STT3BQ8TCJ2 826 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms