RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 DYNLL1P63167 89 aaKnown RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 NUCB2P80303 420 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 MAD2L1Q13257 205 aaPredicted RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 NFIL3Q16649 462 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 KLHL40Q2TBA0 621 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 ZSCAN23Q3MJ62 389 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 CCDC152Q4G0S7 254 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 CAVIN1Q6NZI2 390 aaKnown RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 FAM173BQ6P4H8 233 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 BLOC1S2Q6QNY1 142 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 OLFM4Q6UX06 510 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 CLEC4GQ6UXB4 293 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 BAIAP2L2Q6UXY1 529 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 RRM2BQ7LG56 351 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 SLC16A9Q7RTY1 509 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 NRROSQ86YC3 692 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 PLD3Q8IV08 490 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 CPOQ8IVL8 374 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 MYRIPQ8NFW9 859 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 SDR42E1Q8WUS8 393 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 SEMA4DQ92854 862 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 APBB2Q92870 758 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 NSUN4Q96CB9 384 aaKnown RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 PABPC5Q96DU9 382 aaKnown RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 SLC47A1Q96FL8 570 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 NEK1Q96PY6 1258 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 PSMB7Q99436 277 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 PSMD1Q99460 953 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 RIOK1Q9BRS2 568 aaKnown RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 FUCA2Q9BTY2 467 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 ALDH8A1Q9H2A2 487 aaPredicted RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 LY9Q9HBG7 655 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 RRAGDQ9NQL2 400 aaPredicted RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 PDRG1Q9NUG6 133 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 SAGE1Q9NXZ1 904 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 PTTG2Q9NZH5 202 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 LUZP4Q9P127 313 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 CTSZQ9UBR2 303 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 DNAJB4Q9UDY4 337 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 CNOT7Q9UIV1 285 aaKnown RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 CYP46A1Q9Y6A2 500 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 MYO9BQ13459 2157 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 CHD9Q3L8U1 2897 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 PLIN4Q96Q06 1357 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 SSC5DA1L4H1 1573 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 SCN1AP35498 2009 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 GAKO14976 1311 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 ELP1O95163 1332 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 WDR19Q8NEZ3 1342 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 PTPRDP23468 1912 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 A0A087WWV3 80 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 TEX13CA0A0J9YWL9 993 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 KLF18A0A0U1RQI7 1052 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 SYCE3A1L190 88 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 EIF3FO00303 357 aaPredicted RBP1.47□□□□□ -2.17
CCDC39-203ENST00000473854 ANKRD28O15084 1053 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 AP5Z1O43299 807 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 GPRIN2O60269 458 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 EIF5BO60841 1220 aaKnown RBP1.47□□□□□ -2.17
CCDC39-203ENST00000473854 KHDRBS3O75525 346 aaKnown RBP1.47□□□□□ -2.17
CCDC39-203ENST00000473854 PLEKHA8P1O95397 391 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 POLBP06746 335 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 ZFYP08048 801 aaPredicted RBP1.47□□□□□ -2.17
CCDC39-203ENST00000473854 UQCRFS1P1P0C7P4 283 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 ZSCAN5DPP0CG00 497 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 CNTFP26441 200 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 PGM1P36871 562 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 APOBEC1P41238 236 aaKnown RBP1.47□□□□□ -2.17
CCDC39-203ENST00000473854 MTHFRP42898 656 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 MAGEA11P43364 429 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 GABRB2P47870 512 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 CCR5P51681 352 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 EVCP57679 992 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 ZFP36L1Q07352 338 aaKnown RBP1.47□□□□□ -2.17
CCDC39-203ENST00000473854 PPFIA1Q13136 1202 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 KRT32Q14532 448 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 ALX1Q15699 326 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 SHROOM1Q2M3G4 852 aaPredicted RBP1.47□□□□□ -2.17
CCDC39-203ENST00000473854 USP41Q3LFD5 358 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 CRY2Q49AN0 593 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 CCDC158Q5M9N0 1113 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 FBXO47Q5MNV8 452 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 SLC10A5Q5PT55 438 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 GORABQ5T7V8 394 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 SLC9C2Q5TAH2 1124 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 ATG16L1Q676U5 607 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 CYP26C1Q6V0L0 522 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 Q7L0L9 218 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 SLC47A2Q86VL8 602 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 NBPF5PQ86XG9 351 aaPredicted RBP1.47□□□□□ -2.17
CCDC39-203ENST00000473854 ANKRD18AQ8IVF6 992 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 CCDC13Q8IYE1 715 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 EXOC8Q8IYI6 725 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 HACE1Q8IYU2 909 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 SLCO2A1Q92959 643 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 UBXN10Q96LJ8 280 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 SCLT1Q96NL6 688 aa1.47□□□□□ -2.17
CCDC39-203ENST00000473854 PYM1Q9BRP8 204 aaKnown RBP1.47□□□□□ -2.17
CCDC39-203ENST00000473854 MXD3Q9BW11 206 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms