RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CRABP2P29373 138 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 GRIA3P42263 894 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 GABRA4P48169 554 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 PMS2P54278 862 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 UCNP55089 124 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 ABATP80404 500 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 TLE3Q04726 772 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 PRDX1Q06830 199 aaKnown RBP14.71□□□□□ -0.05
SDC3-203ENST00000471567 BROXQ5VW32 411 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 KIAA1614Q5VZ46 1190 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 PWWP2BQ6NUJ5 590 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 SUSD1Q6UWL2 747 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 SBSNQ6UWP8 590 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 ADAMTSL2Q86TH1 951 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 FAM20CQ8IXL6 584 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 NLGN4XQ8N0W4 816 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 NLGN4YQ8NFZ3 816 aaPredicted RBP14.71□□□□□ -0.05
SDC3-203ENST00000471567 SLC44A1Q8WWI5 657 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 ATL1Q8WXF7 558 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 NKD1Q969G9 470 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 MIPEPQ99797 713 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 TXLNGYQ9BZA5 131 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 PCBD2Q9H0N5 130 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 ARL15Q9NXU5 204 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 ANKMY1Q9P2S6 941 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 CTNNAL1Q9UBT7 734 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 PLCL2Q9UPR0 1127 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 DMXL2Q8TDJ6 3036 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 SDK2Q58EX2 2172 aa14.71□□□□□ -0.05
SDC3-203ENST00000471567 TMEM150CB9EJG8 249 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 PHGDHO43175 533 aaKnown RBP14.7□□□□□ -0.06
SDC3-203ENST00000471567 KIAA0754O94854 1291 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 INHBAP08476 426 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 FAM153BP0C7A2 387 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 CCDC166P0CW27 439 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 CCND1P24385 295 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 ITPKBP27987 946 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 PSMB5P28074 263 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 SLC26A3P40879 764 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 SERPINB9P50453 376 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 ITGA1P56199 1179 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 ATP6V0D1P61421 351 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 CDKL1Q00532 357 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 TGIF1Q15583 401 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 PPP1R3AQ16821 1122 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 FAM153CQ494X1 144 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 ZC3H12BQ5HYM0 836 aaKnown RBP14.7□□□□□ -0.06
SDC3-203ENST00000471567 FCRL6Q6DN72 434 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 AGTRAPQ6RW13 159 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 C6orf15Q6UXA7 325 aaPredicted RBP14.7□□□□□ -0.06
SDC3-203ENST00000471567 CACNA2D3Q8IZS8 1091 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 ESX1Q8N693 406 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 PPFIBP2Q8ND30 876 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 OR1L3Q8NH93 324 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 N4BP2L2Q92802 583 aaPredicted RBP14.7□□□□□ -0.06
SDC3-203ENST00000471567 FBXL8Q96CD0 374 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 MRRFQ96E11 262 aaKnown RBP14.7□□□□□ -0.06
SDC3-203ENST00000471567 UBXN10Q96LJ8 280 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 MRPS30Q9NP92 439 aaKnown RBP14.7□□□□□ -0.06
SDC3-203ENST00000471567 CCDC177Q9NQR7 707 aaPredicted RBP14.7□□□□□ -0.06
SDC3-203ENST00000471567 UTP6Q9NYH9 597 aaKnown RBP14.7□□□□□ -0.06
SDC3-203ENST00000471567 TAC3Q9UHF0 121 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 ZNF180Q9UJW8 692 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 IKZF3Q9UKT9 509 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 KLHL20Q9Y2M5 609 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 PCDHB3Q9Y5E6 796 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 IKBKGQ9Y6K9 419 aa14.7□□□□□ -0.06
SDC3-203ENST00000471567 HMX2A2RU54 273 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 NPEPPSL1A6NEC2 478 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 CDC7O00311 574 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 RIPK2O43353 540 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 SCRG1O75711 98 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 TIAF1O95411 115 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 ZNF28P17035 718 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 HRH2P25021 359 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 MSH2P43246 934 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 RELAQ04206 551 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 ABHD18Q0P651 414 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 TSTA3Q13630 321 aaPredicted RBP14.69□□□□□ -0.06
SDC3-203ENST00000471567 UAP1Q16222 522 aaPredicted RBP14.69□□□□□ -0.06
SDC3-203ENST00000471567 MROH9Q5TGP6 573 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 ICE2Q659A1 982 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 RAPH1Q70E73 1250 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 TAOK1Q7L7X3 1001 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 TIPARPQ7Z3E1 657 aaKnown RBP14.69□□□□□ -0.06
SDC3-203ENST00000471567 TMEM126BQ8IUX1 230 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 GPR135Q8IZ08 494 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 HNRNPLLQ8WVV9 542 aaKnown RBP14.69□□□□□ -0.06
SDC3-203ENST00000471567 CCNL2Q96S94 520 aaPredicted RBP14.69□□□□□ -0.06
SDC3-203ENST00000471567 PAFAH2Q99487 392 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 DPH7Q9BTV6 452 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 ACAT2Q9BWD1 397 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 ANKZF1Q9H8Y5 726 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 ENAMQ9NRM1 1142 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 EURLQ9NYK6 297 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 SNX7Q9UNH6 387 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 OARD1Q9Y530 152 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 PCM1Q15154 2024 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 WDFY3Q8IZQ1 3526 aa14.69□□□□□ -0.06
SDC3-203ENST00000471567 SNRNP200O75643 2136 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms