RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 SLC9A6Q92581 669 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 PAWRQ96IZ0 340 aaKnown RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 FERD3LQ96RJ6 166 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 ARHGAP39Q9C0H5 1083 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 TBC1D17Q9HA65 648 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 TPT1P8Q9HAU6 139 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 FARSBQ9NSD9 589 aaKnown RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 YIPF1Q9Y548 306 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 SCN9AQ15858 1988 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 GOLGB1Q14789 3259 aaKnown RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 A0A1B0GTW7 788 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 FAM240BA0A1B0GVZ2 78 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 FADS2P1A8MWK0 482 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 H0YC42 278 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 SOCS7O14512 581 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 SERPINB7O75635 380 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 UGT2B17O75795 530 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 ZNF12P17014 697 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 MAGEA6P43360 314 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 RAB14P61106 215 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 STX4Q12846 297 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 CLEC12AQ5QGZ9 265 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 KIAA0319Q5VV43 1072 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 ERICH5Q6P6B1 374 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 C11orf88Q6PI97 169 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 SMARCD3Q6STE5 483 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 VTCN1Q7Z7D3 282 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 SLC22A16Q86VW1 577 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 PSD4Q8NDX1 1056 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 FRS2Q8WU20 508 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 HSH2DQ96JZ2 352 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 RIOK2Q9BVS4 552 aaKnown RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 SLC32A1Q9H598 525 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 ZDHHC4Q9NPG8 344 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 RPS6KB2Q9UBS0 482 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 FBXO10Q9UK96 956 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 SPACA6W5XKT8 324 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 A8MV72 311 aaPredicted RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 PLOD2O00469 737 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 HAT1O14929 419 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 ADAMDEC1O15204 470 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 NUDT14O95848 222 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 EOMESO95936 686 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 C9P02748 559 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 ADH1AP07327 375 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 ALPPL2P10696 532 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 CTNNB1P35222 781 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 BDKRB1P46663 353 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 RXRGP48443 463 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 TAS2R41P59536 307 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 EMX2Q04743 252 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 SLBPQ14493 270 aaKnown RBP eCLIP8.85□□□□□ -0.99
HPS4-208ENST00000464362 RFTN1Q14699 578 aaPredicted RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 QPRTQ15274 297 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 SF1Q15637 639 aaKnown RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 PKDCCQ504Y2 493 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 IFI44LQ53G44 452 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 C6orf141Q5SZD1 244 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 CXorf57Q6NSI4 855 aaKnown RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 PGM2L1Q6PCE3 622 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 RETREG3Q86VR2 466 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 ARHGAP12Q8IWW6 846 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 KCNJ9Q92806 393 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 PSKH2Q96QS6 385 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 POLR2J2Q9GZM3 115 aaKnown RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 SUV39H2Q9H5I1 410 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 AIG1Q9NVV5 245 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 THUMPD1Q9NXG2 353 aaKnown RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 COMMD3Q9UBI1 195 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 FBXW2Q9UKT8 454 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 RUVBL1Q9Y265 456 aaKnown RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 PCDHGA11Q9Y5H2 935 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 COL4A1P02462 1669 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 GSAPA4D1B5 854 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 COCHO43405 550 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 ABCB7O75027 752 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 PAPSS2O95340 614 aaPredicted RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 POP4O95707 220 aaKnown RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 C8AP07357 584 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 ACRP10323 421 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 TNFRSF1BP20333 461 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 PPIBP23284 216 aaKnown RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 ASMTP46597 345 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 ERVPABLB-1P60509 514 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 TARDBPQ13148 414 aaKnown RBP eCLIP8.85□□□□□ -0.99
HPS4-208ENST00000464362 ZNF829Q3KNS6 432 aaPredicted RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 DCST1Q5T197 706 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 CDC73Q6P1J9 531 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 ZNF773Q6PK81 442 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 SNX29P2Q8IUI4 249 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 SLC43A3Q8NBI5 491 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 RAB8BQ92930 207 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 COL21A1Q96P44 957 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 NAA50Q9GZZ1 169 aaKnown RBP8.85□□□□□ -0.99
HPS4-208ENST00000464362 MAT2BQ9NZL9 334 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 ERVK-18Q9QC07 812 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 HCSTQ9UBK5 93 aa8.85□□□□□ -0.99
HPS4-208ENST00000464362 RP1P56715 2156 aa8.84□□□□□ -0.99
HPS4-208ENST00000464362 AP3D1O14617 1153 aa8.84□□□□□ -0.99
HPS4-208ENST00000464362 GRM6O15303 877 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms