RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 CELF6Q96J87 481 aaKnown RBP13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 MFSD1Q9H3U5 465 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 TPRKBQ9Y3C4 175 aa13.14□□□□□ -0.31
SYNGAP1-204ENST00000449372 MOXD2PA6NHM9 499 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 FXYD1O00168 92 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 CACNG3O60359 315 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 TSC22D2O75157 780 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 HGFP14210 728 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 HOXC13P31276 330 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 ARHGDIAP52565 204 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 OVOS1Q6IE37 1185 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 THEM5Q8N1Q8 247 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 YIPF7Q8N8F6 280 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 PTGR2Q8N8N7 351 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 BCL7CQ8WUZ0 217 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 EXT2Q93063 718 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 FBXW5Q969U6 566 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 GPR78Q96P69 363 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 TSEN34Q9BSV6 310 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 TRAF4Q9BUZ4 470 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 TFB2MQ9H5Q4 396 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 SNX10Q9Y5X0 201 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 SHROOM3Q8TF72 1996 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 A0A1W2PP18 115 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 OAZ2O95190 189 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 FTH1P02794 183 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 MT-ND2P03891 347 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 CCNYL3P0C7X3 344 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 CSTF2P33240 577 aaKnown RBP eCLIP13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 RFX2P48378 723 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 WNT3AP56704 352 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 LIPEQ05469 1076 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 TNK1Q13470 666 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 RABL3Q5HYI8 236 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZNF678Q5SXM1 525 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 C6orf132Q5T0Z8 1188 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 PIK3R6Q5UE93 754 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 SCD5Q86SK9 330 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 RNF180Q86T96 592 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 TRIM48Q8IWZ4 208 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 SVOPLQ8N434 492 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 FBXO39Q8N4B4 442 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 PXYLP1Q8TE99 480 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 TRNT1Q96Q11 434 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 SDHCQ99643 169 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 PIF1Q9H611 641 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 GMEB2Q9UKD1 530 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 PCDHGB2Q9Y5G2 931 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 CIB4A0PJX0 185 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 DSCR3O14972 297 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 UGT2B17O75795 530 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 HTR1EP28566 365 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 MTHFRP42898 656 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 UGT2B15P54855 530 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 LCP2Q13094 533 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 KIAA1324Q6UXG2 1013 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 PRSS42Q7Z5A4 293 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 METTL3Q86U44 580 aaKnown RBP13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 CRIPAKQ8N1N5 446 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 RHEBL1Q8TAI7 183 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 SETD6Q8TBK2 473 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 CCDC32Q9BV29 185 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 ACOT13Q9NPJ3 140 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZIM2Q9NZV7 527 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 CPNE7Q9UBL6 633 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 SLC23A1Q9UHI7 598 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 LYVE1Q9Y5Y7 322 aa13.13□□□□□ -0.31
SYNGAP1-204ENST00000449372 SUPT3HB4E1H0 165 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 STX7O15400 261 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 ADORA3P0DMS8 318 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 TNNI3P19429 210 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 CSRP3P50461 194 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 GPR85P60893 370 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 PRKG2Q13237 762 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 SLC24A5Q71RS6 500 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 LIX1LQ8IVB5 337 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZNF557Q8N988 423 aaPredicted RBP13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 OR56A4Q8NGH8 313 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 AKTIPQ9H8T0 292 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 SCN3BQ9NY72 215 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 USE1Q9NZ43 259 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 C3orf18Q9UK00 162 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 RNF112Q9ULX5 631 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 TTC3P53804 2025 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 H0YC42 278 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 CDK14O94921 469 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZNF30P17039 623 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 TGFBR2P37173 567 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 CASP2P42575 452 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 PLK1P53350 603 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 ZNF691Q5VV52 312 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 ANKRD34AQ69YU3 496 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 CEP97Q8IW35 865 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 HS3ST5Q8IZT8 346 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 IER2Q9BTL4 223 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 ABCC13Q9NSE7 274 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 PCDHA9Q9Y5H5 950 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 MYLKQ15746 1914 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 NUP205Q92621 2012 aa13.12□□□□□ -0.31
SYNGAP1-204ENST00000449372 DOCK4Q8N1I0 1966 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms