RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 HAUS8Q9BT25 410 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 EHD1Q9H4M9 534 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 STN1Q9H668 368 aaKnown RBP18.64■□□□□ 0.57
RPS28-202ENST00000449223 PNPOQ9NVS9 261 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 NLGN3Q9NZ94 848 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 VTI1BQ9UEU0 232 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 TRPS1Q9UHF7 1281 aa18.64■□□□□ 0.57
RPS28-202ENST00000449223 FRYLO94915 3013 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 ZNF195O14628 629 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 GIPC1O14908 333 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 WFS1O76024 890 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 ENO1P06733 434 aaKnown RBP18.63■□□□□ 0.57
RPS28-202ENST00000449223 CCT8P50990 548 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 ERVPABLB-1P60509 514 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 TERF2Q15554 542 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 TBCCQ15814 346 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 LPAL2Q16609 132 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 DEFB133Q30KQ1 61 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 UGT3A2Q3SY77 523 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 PRAMEF13Q5VWM6 474 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 KANK2Q63ZY3 851 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 LETMD1Q6P1Q0 360 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 RNF165Q6ZSG1 346 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 ARL14Q8N4G2 192 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 OR4F6Q8NGB9 312 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 BCAS4Q8TDM0 211 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 DUSP23Q9BVJ7 150 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 NUSAP1Q9BXS6 441 aaKnown RBP18.63■□□□□ 0.57
RPS28-202ENST00000449223 GAREM1Q9H706 876 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 TRAF6Q9Y4K3 522 aa18.63■□□□□ 0.57
RPS28-202ENST00000449223 TRBV23OR9-2A0A075B6M9 112 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 LILRA5A6NI73 299 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 AZIN1O14977 448 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 HDAC3O15379 428 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 UROSP10746 265 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 TCF15Q12870 199 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 C14orf28Q4W4Y0 310 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 LIPJQ5W064 366 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 SUSD1Q6UWL2 747 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 SPATA21Q7Z572 469 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 ADGRF3Q8IZF5 1079 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 AFAP1L2Q8N4X5 818 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 ARL10Q8N8L6 244 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 SNX31Q8N9S9 440 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 SH3KBP1Q96B97 665 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 NRTNQ99748 197 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 SHCBP1LQ9BZQ2 653 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 FAM107BQ9H098 131 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 ARRDC1-AS1Q9H2J1 176 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 XKR8Q9H6D3 395 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 KCNK13Q9HB14 408 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 MARCOQ9UEW3 520 aaPredicted RBP18.62■□□□□ 0.57
RPS28-202ENST00000449223 USH1CQ9Y6N9 552 aa18.62■□□□□ 0.57
RPS28-202ENST00000449223 GPR179Q6PRD1 2367 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 PCDHGA12O60330 932 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 PRAMEF4O60810 478 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 CLDN9O95484 217 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 RETP07949 1114 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 ZNF883P0CG24 379 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 PRAMEF9Q5VWM5 478 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 MILR1Q7Z6M3 343 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 SUMF1Q8NBK3 374 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 OR2A1Q8NGT9 310 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 OR4C6Q8NH72 309 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 ZNF473Q8WTR7 871 aaKnown RBP18.61■□□□□ 0.57
RPS28-202ENST00000449223 NEIL2Q969S2 332 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 ATP6V1E2Q96A05 226 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 SLC22A18Q96BI1 424 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 ELAC2Q9BQ52 826 aaKnown RBP18.61■□□□□ 0.57
RPS28-202ENST00000449223 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.61■□□□□ 0.57
RPS28-202ENST00000449223 SLC29A3Q9BZD2 475 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 SRMSQ9H3Y6 488 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 NPHS2Q9NP85 383 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 FSCN3Q9NQT6 498 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 KCNK4Q9NYG8 393 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 PCDHB11Q9Y5F2 797 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 DNAJC15Q9Y5T4 150 aa18.61■□□□□ 0.57
RPS28-202ENST00000449223 KCNE1BA0A087WTH5 132 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 TMEM233B4DJY2 109 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 NDUFAB1O14561 156 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 HGSO14964 777 aaPredicted RBP18.6■□□□□ 0.57
RPS28-202ENST00000449223 CLGNO14967 610 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 OR4F21O95013 312 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 CHRM5P08912 532 aaPredicted RBP18.6■□□□□ 0.57
RPS28-202ENST00000449223 KITP10721 976 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 PEBP1P30086 187 aaKnown RBP18.6■□□□□ 0.57
RPS28-202ENST00000449223 INHBCP55103 352 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 FOXA1P55317 472 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 MAZP56270 477 aaKnown RBP18.6■□□□□ 0.57
RPS28-202ENST00000449223 PRDX1Q06830 199 aaKnown RBP18.6■□□□□ 0.57
RPS28-202ENST00000449223 KIR2DS3Q14952 304 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 NR1D2Q14995 579 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 GKAP1Q5VSY0 366 aaPredicted RBP18.6■□□□□ 0.57
RPS28-202ENST00000449223 ATG9BQ674R7 924 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 ZCCHC8Q6NZY4 707 aaKnown RBP18.6■□□□□ 0.57
RPS28-202ENST00000449223 SLCO4C1Q6ZQN7 724 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 EFL1Q7Z2Z2 1120 aaKnown RBP18.6■□□□□ 0.57
RPS28-202ENST00000449223 MAVSQ7Z434 540 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 ZNF438Q7Z4V0 828 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 FAM181AQ8N9Y4 354 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms